BLASTX nr result
ID: Coptis24_contig00035904
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00035904
(376 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004146767.1| PREDICTED: probable phosphatidylinositol 4-k... 84 7e-27
ref|XP_002892764.1| phosphatidylinositol 3-and 4-kinase family p... 80 3e-25
ref|NP_563930.1| phosphatidylinositol 3- and 4-kinase-like prote... 79 4e-25
gb|AAF81291.1|AC027656_8 Strong similarity to an unknown protein... 79 4e-25
ref|XP_002267025.1| PREDICTED: probable phosphatidylinositol 4-k... 77 2e-24
>ref|XP_004146767.1| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta
At1g26270-like [Cucumis sativus]
gi|449523902|ref|XP_004168962.1| PREDICTED: probable
phosphatidylinositol 4-kinase type 2-beta At1g26270-like
[Cucumis sativus]
Length = 645
Score = 84.3 bits (207), Expect(2) = 7e-27
Identities = 48/86 (55%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Frame = -3
Query: 233 NVPHTALVKITHYVSNLNEGMDEKKQVSKVSMIANVRLFE*FILHDFNARD-GTSSFSVA 57
NVPHTALVKITH + N+N+G++ SK +I+ + F+ FI HDF+A D GTSSF V
Sbjct: 241 NVPHTALVKITHSIFNVNDGVNGNMPPSKKKLISKIASFQEFIPHDFDASDHGTSSFPVV 300
Query: 56 AVHRIGILDIN--------QNLLVRK 3
AVHRIGILDI NLLVRK
Sbjct: 301 AVHRIGILDIRVFNTDRHAGNLLVRK 326
Score = 61.2 bits (147), Expect(2) = 7e-27
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = -2
Query: 369 PINRKGFVGKALGQLGGFMMQSVRIGETGIREIAMYLLDYDH 244
P N KGFVGKALGQ G + +SVR+GETG RE+A YLLDYDH
Sbjct: 199 PNNPKGFVGKALGQPG--LKRSVRVGETGFREVAAYLLDYDH 238
>ref|XP_002892764.1| phosphatidylinositol 3-and 4-kinase family protein [Arabidopsis
lyrata subsp. lyrata] gi|297338606|gb|EFH69023.1|
phosphatidylinositol 3-and 4-kinase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 623
Score = 79.7 bits (195), Expect(2) = 3e-25
Identities = 47/88 (53%), Positives = 60/88 (68%), Gaps = 10/88 (11%)
Frame = -3
Query: 236 TNVPHTALVKITHYVSNLNEGMDEKKQVSKVSMIAN-VRLFE*FILHDFNARD-GTSSFS 63
+NVP TALVKITH V N+N+GMD K K ++++ + F+ F+ HDF+A D GTSSF
Sbjct: 236 SNVPPTALVKITHSVFNVNDGMDGNKSREKKKLVSSKIASFQKFVPHDFDASDHGTSSFP 295
Query: 62 VAAVHRIGILDI--------NQNLLVRK 3
VA+VHRIGILDI NLLV+K
Sbjct: 296 VASVHRIGILDIRILNTDRHGGNLLVKK 323
Score = 60.5 bits (145), Expect(2) = 3e-25
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = -2
Query: 369 PINRKGFVGKALGQLGGFMMQSVRIGETGIREIAMYLLDYDH 244
P N KGFVGKALGQ G + SVR+GETG RE+A YLLDYDH
Sbjct: 195 PNNPKGFVGKALGQPG--LKPSVRVGETGFREVAAYLLDYDH 234
>ref|NP_563930.1| phosphatidylinositol 3- and 4-kinase-like protein [Arabidopsis
thaliana] gi|16974596|gb|AAL31202.1| At1g13640/F21F23_7
[Arabidopsis thaliana] gi|23506173|gb|AAN31098.1|
At1g13640/F21F23_7 [Arabidopsis thaliana]
gi|332190932|gb|AEE29053.1| phosphatidylinositol 3- and
4-kinase-like protein [Arabidopsis thaliana]
Length = 622
Score = 79.3 bits (194), Expect(2) = 4e-25
Identities = 47/87 (54%), Positives = 59/87 (67%), Gaps = 10/87 (11%)
Frame = -3
Query: 233 NVPHTALVKITHYVSNLNEGMDEKKQVSKVSMIAN-VRLFE*FILHDFNARD-GTSSFSV 60
NVP TALVKITH V N+N+GMD K K ++++ + F+ F+ HDF+A D GTSSF V
Sbjct: 237 NVPPTALVKITHSVFNVNDGMDGNKSREKKKLVSSKIASFQKFVPHDFDASDHGTSSFPV 296
Query: 59 AAVHRIGILDI--------NQNLLVRK 3
A+VHRIGILDI NLLV+K
Sbjct: 297 ASVHRIGILDIRILNTDRHGGNLLVKK 323
Score = 60.5 bits (145), Expect(2) = 4e-25
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = -2
Query: 369 PINRKGFVGKALGQLGGFMMQSVRIGETGIREIAMYLLDYDH 244
P N KGFVGKALGQ G + SVR+GETG RE+A YLLDYDH
Sbjct: 195 PNNPKGFVGKALGQPG--LKPSVRVGETGFREVAAYLLDYDH 234
>gb|AAF81291.1|AC027656_8 Strong similarity to an unknown protein At2g03890 gi|4582436 from
Arabidopsis thaliana BAC T18C20 gb|AC007196. ESTs
gb|AI993825, gb|T13863, gb|N65091, gb|AI998990,
gb|W43493 and gb|AA585974 come from this gene
[Arabidopsis thaliana]
Length = 620
Score = 79.3 bits (194), Expect(2) = 4e-25
Identities = 47/87 (54%), Positives = 59/87 (67%), Gaps = 10/87 (11%)
Frame = -3
Query: 233 NVPHTALVKITHYVSNLNEGMDEKKQVSKVSMIAN-VRLFE*FILHDFNARD-GTSSFSV 60
NVP TALVKITH V N+N+GMD K K ++++ + F+ F+ HDF+A D GTSSF V
Sbjct: 235 NVPPTALVKITHSVFNVNDGMDGNKSREKKKLVSSKIASFQKFVPHDFDASDHGTSSFPV 294
Query: 59 AAVHRIGILDI--------NQNLLVRK 3
A+VHRIGILDI NLLV+K
Sbjct: 295 ASVHRIGILDIRILNTDRHGGNLLVKK 321
Score = 60.5 bits (145), Expect(2) = 4e-25
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = -2
Query: 369 PINRKGFVGKALGQLGGFMMQSVRIGETGIREIAMYLLDYDH 244
P N KGFVGKALGQ G + SVR+GETG RE+A YLLDYDH
Sbjct: 193 PNNPKGFVGKALGQPG--LKPSVRVGETGFREVAAYLLDYDH 232
>ref|XP_002267025.1| PREDICTED: probable phosphatidylinositol 4-kinase type 2-beta
At1g26270 isoform 1 [Vitis vinifera]
gi|147838249|emb|CAN76598.1| hypothetical protein
VITISV_005885 [Vitis vinifera]
Length = 640
Score = 77.4 bits (189), Expect(2) = 2e-24
Identities = 47/86 (54%), Positives = 57/86 (66%), Gaps = 9/86 (10%)
Frame = -3
Query: 233 NVPHTALVKITHYVSNLNEGMDEKKQVSKVSMIANVRLFE*FILHDFNARD-GTSSFSVA 57
NVP TALVKITH + N+N+G++ K K ++ + F+ FI HDF+A D GTSSF VA
Sbjct: 240 NVPPTALVKITHSIFNVNDGVNGNKPHQK-EQVSKIASFQQFIPHDFDASDHGTSSFPVA 298
Query: 56 AVHRIGILDIN--------QNLLVRK 3
AVHRIGILDI NLLVRK
Sbjct: 299 AVHRIGILDIRILNTDRHAGNLLVRK 324
Score = 60.1 bits (144), Expect(2) = 2e-24
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = -2
Query: 369 PINRKGFVGKALGQLGGFMMQSVRIGETGIREIAMYLLDYDH 244
P N KGFVGKALGQ G + ++VR+GETG RE+A YLLDYDH
Sbjct: 198 PNNPKGFVGKALGQPG--LKRTVRVGETGFREVAAYLLDYDH 237