BLASTX nr result

ID: Coptis24_contig00035901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035901
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150673.1| PREDICTED: ATP synthase subunit beta, mitoch...    98   2e-35
ref|XP_002311483.1| predicted protein [Populus trichocarpa] gi|2...    98   2e-35
gb|AAD03394.1| ATPase beta subunit [Nicotiana sylvestris]              98   2e-35
ref|NP_001043900.1| Os01g0685800 [Oryza sativa Japonica Group] g...    98   3e-35
tpg|DAA58078.1| TPA: ATP synthase subunit beta family protein [Z...    98   3e-35

>ref|XP_004150673.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like [Cucumis
           sativus] gi|449519398|ref|XP_004166722.1| PREDICTED: ATP
           synthase subunit beta, mitochondrial-like [Cucumis
           sativus]
          Length = 560

 Score = 98.2 bits (243), Expect(2) = 2e-35
 Identities = 49/53 (92%), Positives = 51/53 (96%)
 Frame = +2

Query: 164 RKVLQNYKNLQDIIAILGMDELSEDDKLIVARARKIQRFLSQPFHVAEVFTAS 322
           +KVLQNYKNLQDIIAILGMDELSEDDKL VARARKIQRFLSQPFHVAEVFT +
Sbjct: 456 QKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGA 508



 Score = 75.9 bits (185), Expect(2) = 2e-35
 Identities = 36/39 (92%), Positives = 36/39 (92%)
 Frame = +1

Query: 52  QISELGICPVVDPLDSTCRMLSPHILGEDHYNTARGVQK 168
           QISELGI P VDPLDST RMLSPHILGEDHYNTARGVQK
Sbjct: 419 QISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQK 457


>ref|XP_002311483.1| predicted protein [Populus trichocarpa] gi|222851303|gb|EEE88850.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score = 98.2 bits (243), Expect(2) = 2e-35
 Identities = 49/53 (92%), Positives = 51/53 (96%)
 Frame = +2

Query: 164 RKVLQNYKNLQDIIAILGMDELSEDDKLIVARARKIQRFLSQPFHVAEVFTAS 322
           +KVLQNYKNLQDIIAILGMDELSEDDKL VARARKIQRFLSQPFHVAEVFT +
Sbjct: 454 QKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGA 506



 Score = 75.9 bits (185), Expect(2) = 2e-35
 Identities = 36/39 (92%), Positives = 36/39 (92%)
 Frame = +1

Query: 52  QISELGICPVVDPLDSTCRMLSPHILGEDHYNTARGVQK 168
           QISELGI P VDPLDST RMLSPHILGEDHYNTARGVQK
Sbjct: 417 QISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQK 455


>gb|AAD03394.1| ATPase beta subunit [Nicotiana sylvestris]
          Length = 553

 Score = 98.2 bits (243), Expect(2) = 2e-35
 Identities = 49/53 (92%), Positives = 51/53 (96%)
 Frame = +2

Query: 164 RKVLQNYKNLQDIIAILGMDELSEDDKLIVARARKIQRFLSQPFHVAEVFTAS 322
           +KVLQNYKNLQDIIAILGMDELSEDDKL VARARKIQRFLSQPFHVAEVFT +
Sbjct: 449 QKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGA 501



 Score = 75.9 bits (185), Expect(2) = 2e-35
 Identities = 36/39 (92%), Positives = 36/39 (92%)
 Frame = +1

Query: 52  QISELGICPVVDPLDSTCRMLSPHILGEDHYNTARGVQK 168
           QISELGI P VDPLDST RMLSPHILGEDHYNTARGVQK
Sbjct: 412 QISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQK 450


>ref|NP_001043900.1| Os01g0685800 [Oryza sativa Japonica Group]
           gi|113533431|dbj|BAF05814.1| Os01g0685800 [Oryza sativa
           Japonica Group]
          Length = 557

 Score = 98.2 bits (243), Expect(2) = 3e-35
 Identities = 49/53 (92%), Positives = 51/53 (96%)
 Frame = +2

Query: 164 RKVLQNYKNLQDIIAILGMDELSEDDKLIVARARKIQRFLSQPFHVAEVFTAS 322
           +KVLQNYKNLQDIIAILGMDELSEDDKL VARARKIQRFLSQPFHVAEVFT +
Sbjct: 453 QKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGA 505



 Score = 75.5 bits (184), Expect(2) = 3e-35
 Identities = 35/39 (89%), Positives = 36/39 (92%)
 Frame = +1

Query: 52  QISELGICPVVDPLDSTCRMLSPHILGEDHYNTARGVQK 168
           QISELGI P VDPLDST RMLSPH+LGEDHYNTARGVQK
Sbjct: 416 QISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQK 454


>tpg|DAA58078.1| TPA: ATP synthase subunit beta family protein [Zea mays]
          Length = 554

 Score = 98.2 bits (243), Expect(2) = 3e-35
 Identities = 49/53 (92%), Positives = 51/53 (96%)
 Frame = +2

Query: 164 RKVLQNYKNLQDIIAILGMDELSEDDKLIVARARKIQRFLSQPFHVAEVFTAS 322
           +KVLQNYKNLQDIIAILGMDELSEDDKL VARARKIQRFLSQPFHVAEVFT +
Sbjct: 450 QKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGA 502



 Score = 75.5 bits (184), Expect(2) = 3e-35
 Identities = 35/39 (89%), Positives = 36/39 (92%)
 Frame = +1

Query: 52  QISELGICPVVDPLDSTCRMLSPHILGEDHYNTARGVQK 168
           QISELGI P VDPLDST RMLSPH+LGEDHYNTARGVQK
Sbjct: 413 QISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQK 451


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