BLASTX nr result
ID: Coptis24_contig00035901
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035901 (335 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004150673.1| PREDICTED: ATP synthase subunit beta, mitoch... 98 2e-35 ref|XP_002311483.1| predicted protein [Populus trichocarpa] gi|2... 98 2e-35 gb|AAD03394.1| ATPase beta subunit [Nicotiana sylvestris] 98 2e-35 ref|NP_001043900.1| Os01g0685800 [Oryza sativa Japonica Group] g... 98 3e-35 tpg|DAA58078.1| TPA: ATP synthase subunit beta family protein [Z... 98 3e-35 >ref|XP_004150673.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like [Cucumis sativus] gi|449519398|ref|XP_004166722.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like [Cucumis sativus] Length = 560 Score = 98.2 bits (243), Expect(2) = 2e-35 Identities = 49/53 (92%), Positives = 51/53 (96%) Frame = +2 Query: 164 RKVLQNYKNLQDIIAILGMDELSEDDKLIVARARKIQRFLSQPFHVAEVFTAS 322 +KVLQNYKNLQDIIAILGMDELSEDDKL VARARKIQRFLSQPFHVAEVFT + Sbjct: 456 QKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGA 508 Score = 75.9 bits (185), Expect(2) = 2e-35 Identities = 36/39 (92%), Positives = 36/39 (92%) Frame = +1 Query: 52 QISELGICPVVDPLDSTCRMLSPHILGEDHYNTARGVQK 168 QISELGI P VDPLDST RMLSPHILGEDHYNTARGVQK Sbjct: 419 QISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQK 457 >ref|XP_002311483.1| predicted protein [Populus trichocarpa] gi|222851303|gb|EEE88850.1| predicted protein [Populus trichocarpa] Length = 559 Score = 98.2 bits (243), Expect(2) = 2e-35 Identities = 49/53 (92%), Positives = 51/53 (96%) Frame = +2 Query: 164 RKVLQNYKNLQDIIAILGMDELSEDDKLIVARARKIQRFLSQPFHVAEVFTAS 322 +KVLQNYKNLQDIIAILGMDELSEDDKL VARARKIQRFLSQPFHVAEVFT + Sbjct: 454 QKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGA 506 Score = 75.9 bits (185), Expect(2) = 2e-35 Identities = 36/39 (92%), Positives = 36/39 (92%) Frame = +1 Query: 52 QISELGICPVVDPLDSTCRMLSPHILGEDHYNTARGVQK 168 QISELGI P VDPLDST RMLSPHILGEDHYNTARGVQK Sbjct: 417 QISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQK 455 >gb|AAD03394.1| ATPase beta subunit [Nicotiana sylvestris] Length = 553 Score = 98.2 bits (243), Expect(2) = 2e-35 Identities = 49/53 (92%), Positives = 51/53 (96%) Frame = +2 Query: 164 RKVLQNYKNLQDIIAILGMDELSEDDKLIVARARKIQRFLSQPFHVAEVFTAS 322 +KVLQNYKNLQDIIAILGMDELSEDDKL VARARKIQRFLSQPFHVAEVFT + Sbjct: 449 QKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGA 501 Score = 75.9 bits (185), Expect(2) = 2e-35 Identities = 36/39 (92%), Positives = 36/39 (92%) Frame = +1 Query: 52 QISELGICPVVDPLDSTCRMLSPHILGEDHYNTARGVQK 168 QISELGI P VDPLDST RMLSPHILGEDHYNTARGVQK Sbjct: 412 QISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQK 450 >ref|NP_001043900.1| Os01g0685800 [Oryza sativa Japonica Group] gi|113533431|dbj|BAF05814.1| Os01g0685800 [Oryza sativa Japonica Group] Length = 557 Score = 98.2 bits (243), Expect(2) = 3e-35 Identities = 49/53 (92%), Positives = 51/53 (96%) Frame = +2 Query: 164 RKVLQNYKNLQDIIAILGMDELSEDDKLIVARARKIQRFLSQPFHVAEVFTAS 322 +KVLQNYKNLQDIIAILGMDELSEDDKL VARARKIQRFLSQPFHVAEVFT + Sbjct: 453 QKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGA 505 Score = 75.5 bits (184), Expect(2) = 3e-35 Identities = 35/39 (89%), Positives = 36/39 (92%) Frame = +1 Query: 52 QISELGICPVVDPLDSTCRMLSPHILGEDHYNTARGVQK 168 QISELGI P VDPLDST RMLSPH+LGEDHYNTARGVQK Sbjct: 416 QISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQK 454 >tpg|DAA58078.1| TPA: ATP synthase subunit beta family protein [Zea mays] Length = 554 Score = 98.2 bits (243), Expect(2) = 3e-35 Identities = 49/53 (92%), Positives = 51/53 (96%) Frame = +2 Query: 164 RKVLQNYKNLQDIIAILGMDELSEDDKLIVARARKIQRFLSQPFHVAEVFTAS 322 +KVLQNYKNLQDIIAILGMDELSEDDKL VARARKIQRFLSQPFHVAEVFT + Sbjct: 450 QKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGA 502 Score = 75.5 bits (184), Expect(2) = 3e-35 Identities = 35/39 (89%), Positives = 36/39 (92%) Frame = +1 Query: 52 QISELGICPVVDPLDSTCRMLSPHILGEDHYNTARGVQK 168 QISELGI P VDPLDST RMLSPH+LGEDHYNTARGVQK Sbjct: 413 QISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQK 451