BLASTX nr result

ID: Coptis24_contig00035900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035900
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632759.1| PREDICTED: ABC transporter B family member 1...   169   2e-40
ref|XP_002529182.1| multidrug resistance protein 1, 2, putative ...   156   1e-36
ref|XP_002331205.1| multidrug/pheromone exporter, MDR family, AB...   150   1e-34
ref|XP_003627370.1| ABC transporter B family member [Medicago tr...   141   6e-32
ref|XP_004141818.1| PREDICTED: ABC transporter B family member 1...   140   8e-32

>ref|XP_003632759.1| PREDICTED: ABC transporter B family member 19-like [Vitis vinifera]
          Length = 1542

 Score =  169 bits (428), Expect = 2e-40
 Identities = 90/165 (54%), Positives = 114/165 (69%), Gaps = 4/165 (2%)
 Frame = -3

Query: 483  GAYFNLVKLASETISQPNPKQNFDMERSF----YDKSVYDVSKSKHANDISRSRYAKSMQ 316
            GAY+NLVKLASE +S+P  KQ+  + ++     Y++SVY+VSKSK+ N+ SRS+Y  SMQ
Sbjct: 880  GAYYNLVKLASEAVSKPLSKQDGSIIKATKLPSYERSVYEVSKSKYMNEASRSKYLTSMQ 939

Query: 315  XXXXXXXXXXXEQKPNKIQLSKLWKLQKPEASMLFLGFLLGMHAGAILSIFPLLLGLALE 136
                       E KP K+ +S+++KLQ+PE  ML LGFLLGMHAGAILSIFP +LGLAL+
Sbjct: 940  EQYKEEEEEKPEPKPGKVLVSEIFKLQRPELLMLLLGFLLGMHAGAILSIFPFILGLALQ 999

Query: 135  IYFKDDSSKMKREXXXXXXXXXXXXXXXXISMTGQQGFCGWAGTK 1
            IYF DD+SKMKRE                I++ GQQGFCGWAGTK
Sbjct: 1000 IYFGDDTSKMKREVGVLSLVIVGLGFGCVITLVGQQGFCGWAGTK 1044


>ref|XP_002529182.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223531360|gb|EEF33196.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1580

 Score =  156 bits (395), Expect = 1e-36
 Identities = 85/165 (51%), Positives = 110/165 (66%), Gaps = 4/165 (2%)
 Frame = -3

Query: 483  GAYFNLVKLASETISQPNPKQ---NFDMERSFYDKSVYDVSKSKHANDISRSRYAKSMQX 313
            GAY++LVKLASE +S+P  K+   + + E S + KSV+D  +SK+  + SRSR+ K MQ 
Sbjct: 919  GAYYDLVKLASEAVSRPTAKEMDTSKETEFSIHGKSVHD-PRSKNVEETSRSRHLKFMQM 977

Query: 312  XXXXXXXXXXEQKPNKIQLSKLWKLQKPEASMLFLGFLLGMHAGAILSIFPLLLGLALEI 133
                      +QKP K  LS++WKLQ+PE  ML LGFLLGMHAGAILS+FP LLGLAL+I
Sbjct: 978  ENQEEEEMQEKQKPRKYHLSEIWKLQRPEVVMLLLGFLLGMHAGAILSVFPFLLGLALQI 1037

Query: 132  YFKDDS-SKMKREXXXXXXXXXXXXXXXXISMTGQQGFCGWAGTK 1
            YF DD+ +K+KR+                ++MTGQQG CGWAGTK
Sbjct: 1038 YFDDDNPAKLKRDVGHIALVLVGLGVGCILTMTGQQGLCGWAGTK 1082


>ref|XP_002331205.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222873326|gb|EEF10457.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1547

 Score =  150 bits (379), Expect = 1e-34
 Identities = 87/164 (53%), Positives = 106/164 (64%), Gaps = 3/164 (1%)
 Frame = -3

Query: 483  GAYFNLVKLASETISQPNPKQNF---DMERSFYDKSVYDVSKSKHANDISRSRYAKSMQX 313
            GAY++LVKLA+E +S+   KQ     DME S Y+KSV D+ +SK+A + S+SRY KSMQ 
Sbjct: 888  GAYYDLVKLATEAVSKSALKQEDAAKDMEFSIYEKSV-DL-RSKNAFETSKSRYLKSMQA 945

Query: 312  XXXXXXXXXXEQKPNKIQLSKLWKLQKPEASMLFLGFLLGMHAGAILSIFPLLLGLALEI 133
                        KP K QLS++W LQ+PE   L LGFLLGMHAGAILS+FP LLG AL I
Sbjct: 946  ENQQEEEMQESAKPRKYQLSEIWGLQRPEIVKLLLGFLLGMHAGAILSVFPYLLGEALTI 1005

Query: 132  YFKDDSSKMKREXXXXXXXXXXXXXXXXISMTGQQGFCGWAGTK 1
            YF+D+  K+KR+                ISMTGQQG CGWAGTK
Sbjct: 1006 YFEDNKFKLKRDVGRLCLILVGLGFGCIISMTGQQGLCGWAGTK 1049


>ref|XP_003627370.1| ABC transporter B family member [Medicago truncatula]
            gi|355521392|gb|AET01846.1| ABC transporter B family
            member [Medicago truncatula]
          Length = 1488

 Score =  141 bits (355), Expect = 6e-32
 Identities = 77/166 (46%), Positives = 103/166 (62%), Gaps = 5/166 (3%)
 Frame = -3

Query: 483  GAYFNLVKLASETISQPNPKQNFDME-----RSFYDKSVYDVSKSKHANDISRSRYAKSM 319
            G YFNLVKLA+E+IS+P P +N +M+      S  +K   D++KS +  DISRS+   SM
Sbjct: 826  GTYFNLVKLATESISKPLPTEN-NMQITKDLSSINNKYAPDIAKSSYLVDISRSKLEDSM 884

Query: 318  QXXXXXXXXXXXEQKPNKIQLSKLWKLQKPEASMLFLGFLLGMHAGAILSIFPLLLGLAL 139
            Q            +K    +LS++WKLQKPE  ML  G ++GM AGA LS+FPL+LG++L
Sbjct: 885  QDENQEDIEDKKYKKSRNYKLSEVWKLQKPEFMMLISGLVMGMFAGACLSLFPLVLGISL 944

Query: 138  EIYFKDDSSKMKREXXXXXXXXXXXXXXXXISMTGQQGFCGWAGTK 1
             +YF DD+SKMKR+                +SMTGQQG CGWAG+K
Sbjct: 945  GVYFSDDTSKMKRDVGYLCLVLVGLGFGCILSMTGQQGLCGWAGSK 990


>ref|XP_004141818.1| PREDICTED: ABC transporter B family member 19-like [Cucumis sativus]
          Length = 1450

 Score =  140 bits (354), Expect = 8e-32
 Identities = 79/161 (49%), Positives = 106/161 (65%)
 Frame = -3

Query: 483  GAYFNLVKLASETISQPNPKQNFDMERSFYDKSVYDVSKSKHANDISRSRYAKSMQXXXX 304
            GAY NLVKLASE + Q +PKQN D+++ F D S  D+SKS++  +IS+SRY KS      
Sbjct: 797  GAYNNLVKLASEAVRQTSPKQN-DVQK-FTDLSFNDISKSEYVVEISKSRYFKST----V 850

Query: 303  XXXXXXXEQKPNKIQLSKLWKLQKPEASMLFLGFLLGMHAGAILSIFPLLLGLALEIYFK 124
                   E+K  K+++++L KLQKPE  ML LGFL+G+ AGAILS+FP +LG AL++YF 
Sbjct: 851  EEKLEKKEEKGRKVRITELLKLQKPEILMLLLGFLMGLSAGAILSVFPFILGEALQVYFD 910

Query: 123  DDSSKMKREXXXXXXXXXXXXXXXXISMTGQQGFCGWAGTK 1
             ++S+MK +                + MTGQQGFCGWAGTK
Sbjct: 911  SEASRMKAKVGHLCIVLVGLGIGCILFMTGQQGFCGWAGTK 951


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