BLASTX nr result

ID: Coptis24_contig00035898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035898
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545771.1| PREDICTED: basic form of pathogenesis-relate...   118   4e-25
gb|ACU15426.1| unknown [Glycine max] gi|255634080|gb|ACU17403.1|...   115   4e-24
ref|XP_002300294.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
ref|XP_003543105.1| PREDICTED: basic form of pathogenesis-relate...   112   3e-23
ref|XP_003545770.1| PREDICTED: basic form of pathogenesis-relate...   111   5e-23

>ref|XP_003545771.1| PREDICTED: basic form of pathogenesis-related protein 1-like
           [Glycine max]
          Length = 164

 Score =  118 bits (296), Expect = 4e-25
 Identities = 49/57 (85%), Positives = 53/57 (92%)
 Frame = -2

Query: 254 YNYNTNACDGGECLHYTQVVWRNSIRLGCAKARCNNGGTFIICNYDPPGNFIGQRPY 84
           YNYN+N+C GGECLHYTQVVWRNS+RLGCAK RCNNGGTFI CNY PPGN+IGQRPY
Sbjct: 108 YNYNSNSCVGGECLHYTQVVWRNSLRLGCAKVRCNNGGTFIGCNYAPPGNYIGQRPY 164


>gb|ACU15426.1| unknown [Glycine max] gi|255634080|gb|ACU17403.1| unknown [Glycine
           max]
          Length = 164

 Score =  115 bits (288), Expect = 4e-24
 Identities = 48/57 (84%), Positives = 52/57 (91%)
 Frame = -2

Query: 254 YNYNTNACDGGECLHYTQVVWRNSIRLGCAKARCNNGGTFIICNYDPPGNFIGQRPY 84
           YNYN+N+C GGECLHYTQVVWRNS+RLGCAK RCNNGGT I CNY PPGN+IGQRPY
Sbjct: 108 YNYNSNSCVGGECLHYTQVVWRNSLRLGCAKVRCNNGGTSIGCNYAPPGNYIGQRPY 164


>ref|XP_002300294.1| predicted protein [Populus trichocarpa]
           gi|224105869|ref|XP_002333756.1| predicted protein
           [Populus trichocarpa] gi|222838424|gb|EEE76789.1|
           predicted protein [Populus trichocarpa]
           gi|222847552|gb|EEE85099.1| predicted protein [Populus
           trichocarpa]
          Length = 161

 Score =  112 bits (281), Expect = 2e-23
 Identities = 45/57 (78%), Positives = 52/57 (91%)
 Frame = -2

Query: 254 YNYNTNACDGGECLHYTQVVWRNSIRLGCAKARCNNGGTFIICNYDPPGNFIGQRPY 84
           Y+YN+N+C GGEC HYTQVVWRNS+RLGCAKARC+NGGT I CNY PPGN++GQRPY
Sbjct: 105 YDYNSNSCVGGECRHYTQVVWRNSVRLGCAKARCSNGGTVISCNYSPPGNYVGQRPY 161


>ref|XP_003543105.1| PREDICTED: basic form of pathogenesis-related protein 1-like
           [Glycine max] gi|356549451|ref|XP_003543107.1|
           PREDICTED: basic form of pathogenesis-related protein
           1-like isoform 1 [Glycine max]
           gi|356549453|ref|XP_003543108.1| PREDICTED: basic form
           of pathogenesis-related protein 1-like isoform 2
           [Glycine max] gi|356549455|ref|XP_003543109.1|
           PREDICTED: basic form of pathogenesis-related protein
           1-like isoform 1 [Glycine max]
           gi|356549457|ref|XP_003543110.1| PREDICTED: basic form
           of pathogenesis-related protein 1-like isoform 2
           [Glycine max] gi|356549459|ref|XP_003543111.1|
           PREDICTED: basic form of pathogenesis-related protein
           1-like [Glycine max] gi|255630250|gb|ACU15480.1| unknown
           [Glycine max]
          Length = 174

 Score =  112 bits (280), Expect = 3e-23
 Identities = 44/57 (77%), Positives = 52/57 (91%)
 Frame = -2

Query: 254 YNYNTNACDGGECLHYTQVVWRNSIRLGCAKARCNNGGTFIICNYDPPGNFIGQRPY 84
           Y+Y++N+C GGECLHYTQVVW NS+RLGCAK  C+NGGTFI CNYDPPGNF+G+RPY
Sbjct: 116 YDYDSNSCVGGECLHYTQVVWANSVRLGCAKVTCDNGGTFITCNYDPPGNFVGERPY 172


>ref|XP_003545770.1| PREDICTED: basic form of pathogenesis-related protein 1-like
           [Glycine max]
          Length = 164

 Score =  111 bits (278), Expect = 5e-23
 Identities = 44/57 (77%), Positives = 52/57 (91%)
 Frame = -2

Query: 254 YNYNTNACDGGECLHYTQVVWRNSIRLGCAKARCNNGGTFIICNYDPPGNFIGQRPY 84
           Y+YN+N+C GGECLHYTQVVWR+S+RLGCAK  C+NGGTFI CNY PPGN++GQRPY
Sbjct: 108 YDYNSNSCVGGECLHYTQVVWRDSVRLGCAKVACDNGGTFITCNYAPPGNYVGQRPY 164


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