BLASTX nr result

ID: Coptis24_contig00035889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035889
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC72747.1| hypothetical protein OsI_06374 [Oryza sativa Indi...    61   8e-08
dbj|BAD17689.1| putative protein kinase Xa21 [Oryza sativa Japon...    57   2e-06
ref|XP_002526891.1| serine-threonine protein kinase, plant-type,...    57   2e-06

>gb|EEC72747.1| hypothetical protein OsI_06374 [Oryza sativa Indica Group]
          Length = 861

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/87 (36%), Positives = 44/87 (50%)
 Frame = -3

Query: 262 PKCQSKDTKKHGKPLAFKIAXXXXXXXXXXXXXLIR*WKRDESKVEDSSWPMKSQHLKIS 83
           P C +  TKK    L   IA             L   W+R +++ +     +   HL++S
Sbjct: 534 PLCSTHSTKKRSLKLIVAIAISSAILLLILLLALFAFWQRSKTQAKSDLSLINDSHLRVS 593

Query: 82  YKELFQATSGFAPTNVLGSGSFGCVYK 2
           Y EL  AT+GFAP N++G GSFG VYK
Sbjct: 594 YAELVNATNGFAPENLIGVGSFGSVYK 620


>dbj|BAD17689.1| putative protein kinase Xa21 [Oryza sativa Japonica Group]
          Length = 1163

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/87 (34%), Positives = 44/87 (50%)
 Frame = -3

Query: 262  PKCQSKDTKKHGKPLAFKIAXXXXXXXXXXXXXLIR*WKRDESKVEDSSWPMKSQHLKIS 83
            P C +  TKK    L   I+             L   W+R++++ +     +   HL++S
Sbjct: 779  PLCSTHSTKKRSLKLIVAISISSGILLLILLLALFAFWQRNKTQAKSDLALINDSHLRVS 838

Query: 82   YKELFQATSGFAPTNVLGSGSFGCVYK 2
            Y EL  AT+ FAP N++G GSFG VYK
Sbjct: 839  YVELVNATNVFAPDNLIGVGSFGSVYK 865


>ref|XP_002526891.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223533790|gb|EEF35522.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 1013

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
 Frame = -3

Query: 262 PKCQSKDTKKHGKPLAFKIAXXXXXXXXXXXXXL---IR*WKRDESKVEDSSWPMKSQHL 92
           P C    + K G  LA K+                  IR  KR +SK   S   +K Q +
Sbjct: 634 PACVVLHSNKKGSSLATKLIAAIVVAFICLALVASFFIRRCKRSKSKERPSPLSLKDQFI 693

Query: 91  KISYKELFQATSGFAPTNVLGSGSFGCVYK 2
           KISY+EL QAT GF+  N++G GS+G VY+
Sbjct: 694 KISYQELLQATDGFSDANLIGFGSYGSVYR 723


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