BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035885
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20399.3| unnamed protein product [Vitis vinifera]               91   9e-31
ref|XP_002284309.2| PREDICTED: ubiquitin carboxyl-terminal hydro...    91   9e-31
ref|XP_004146842.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    89   1e-28
ref|XP_004154814.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    89   1e-28
gb|AFK40689.1| unknown [Lotus japonicus]                               83   1e-26

>emb|CBI20399.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score = 91.3 bits (225), Expect(3) = 9e-31
 Identities = 41/50 (82%), Positives = 46/50 (92%)
 Frame = +1

Query: 391 YKLKGLVNHIGTSAQCGHYYVAHVHKDWRWVIFNDDEVGASINPPKDMGY 540
           Y+L GLV+HIGTS QCGHY VAH++KD RWVIFNDD+VGASINPPKDMGY
Sbjct: 751 YRLIGLVSHIGTSTQCGHY-VAHIYKDGRWVIFNDDKVGASINPPKDMGY 799



 Score = 56.6 bits (135), Expect(3) = 9e-31
 Identities = 30/50 (60%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
 Frame = +3

Query: 3   SHMEDPDINDPISLEEQIADHLSFVDESKLDML--FWFQREIARKALGAS 146
           SHM+DPDI+ PIS E + A+ LSFVD+SK+D L  F FQ +I+R+AL AS
Sbjct: 658 SHMDDPDIDFPISQEAENAEALSFVDQSKVDTLISFGFQEDISRRALRAS 707



 Score = 32.0 bits (71), Expect(3) = 9e-31
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = +2

Query: 257 GGNIEKGTDWIFTHPEVS 310
           GG+IEK TDWIF++P+ +
Sbjct: 708 GGDIEKATDWIFSNPDAA 725


>ref|XP_002284309.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Vitis
           vinifera]
          Length = 794

 Score = 91.3 bits (225), Expect(3) = 9e-31
 Identities = 41/50 (82%), Positives = 46/50 (92%)
 Frame = +1

Query: 391 YKLKGLVNHIGTSAQCGHYYVAHVHKDWRWVIFNDDEVGASINPPKDMGY 540
           Y+L GLV+HIGTS QCGHY VAH++KD RWVIFNDD+VGASINPPKDMGY
Sbjct: 737 YRLIGLVSHIGTSTQCGHY-VAHIYKDGRWVIFNDDKVGASINPPKDMGY 785



 Score = 56.6 bits (135), Expect(3) = 9e-31
 Identities = 30/50 (60%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
 Frame = +3

Query: 3   SHMEDPDINDPISLEEQIADHLSFVDESKLDML--FWFQREIARKALGAS 146
           SHM+DPDI+ PIS E + A+ LSFVD+SK+D L  F FQ +I+R+AL AS
Sbjct: 644 SHMDDPDIDFPISQEAENAEALSFVDQSKVDTLISFGFQEDISRRALRAS 693



 Score = 32.0 bits (71), Expect(3) = 9e-31
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = +2

Query: 257 GGNIEKGTDWIFTHPEVS 310
           GG+IEK TDWIF++P+ +
Sbjct: 694 GGDIEKATDWIFSNPDAA 711


>ref|XP_004146842.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Cucumis
           sativus]
          Length = 807

 Score = 89.0 bits (219), Expect(3) = 1e-28
 Identities = 38/50 (76%), Positives = 44/50 (88%)
 Frame = +1

Query: 391 YKLKGLVNHIGTSAQCGHYYVAHVHKDWRWVIFNDDEVGASINPPKDMGY 540
           YKL G+++HIGTS QCGHY VAH+ KD RWVIFNDD+VG S+NPPKDMGY
Sbjct: 750 YKLMGIISHIGTSTQCGHY-VAHIFKDGRWVIFNDDKVGVSVNPPKDMGY 798



 Score = 50.1 bits (118), Expect(3) = 1e-28
 Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
 Frame = +3

Query: 3   SHMEDPDINDPISLEEQIADHLSFVDESKLDML--FWFQREIARKALGAS 146
           SHM+DPDINDPIS   Q AD +  VD++K+DML  F FQ  IA+KAL AS
Sbjct: 658 SHMDDPDINDPIS---QKADFV--VDQTKVDMLLQFGFQEAIAKKALKAS 702



 Score = 33.9 bits (76), Expect(3) = 1e-28
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +2

Query: 257 GGNIEKGTDWIFTHPEVS 310
           GG+IEK TDWIF +PE S
Sbjct: 703 GGDIEKATDWIFNNPEAS 720


>ref|XP_004154814.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Cucumis
           sativus]
          Length = 793

 Score = 89.0 bits (219), Expect(3) = 1e-28
 Identities = 38/50 (76%), Positives = 44/50 (88%)
 Frame = +1

Query: 391 YKLKGLVNHIGTSAQCGHYYVAHVHKDWRWVIFNDDEVGASINPPKDMGY 540
           YKL G+++HIGTS QCGHY VAH+ KD RWVIFNDD+VG S+NPPKDMGY
Sbjct: 736 YKLMGIISHIGTSTQCGHY-VAHIFKDGRWVIFNDDKVGVSVNPPKDMGY 784



 Score = 50.1 bits (118), Expect(3) = 1e-28
 Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
 Frame = +3

Query: 3   SHMEDPDINDPISLEEQIADHLSFVDESKLDML--FWFQREIARKALGAS 146
           SHM+DPDINDPIS   Q AD +  VD++K+DML  F FQ  IA+KAL AS
Sbjct: 644 SHMDDPDINDPIS---QKADFV--VDQTKVDMLLQFGFQEAIAKKALKAS 688



 Score = 33.9 bits (76), Expect(3) = 1e-28
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +2

Query: 257 GGNIEKGTDWIFTHPEVS 310
           GG+IEK TDWIF +PE S
Sbjct: 689 GGDIEKATDWIFNNPEAS 706


>gb|AFK40689.1| unknown [Lotus japonicus]
          Length = 244

 Score = 82.8 bits (203), Expect(3) = 1e-26
 Identities = 37/54 (68%), Positives = 44/54 (81%)
 Frame = +1

Query: 391 YKLKGLVNHIGTSAQCGHYYVAHVHKDWRWVIFNDDEVGASINPPKDMGYACIY 552
           Y+L G+V+H GTS  CGHY VAH+ KD RWVIFNDD+VGASI+PPK+MGY   Y
Sbjct: 187 YRLMGVVSHSGTSVHCGHY-VAHILKDGRWVIFNDDKVGASISPPKEMGYLYFY 239



 Score = 48.9 bits (115), Expect(3) = 1e-26
 Identities = 28/50 (56%), Positives = 38/50 (76%), Gaps = 2/50 (4%)
 Frame = +3

Query: 3   SHMEDPDINDPISLEEQIADHLSFVDESKLDML--FWFQREIARKALGAS 146
           SHM+DPDI++PI+   + ++ L+ VD+SK+D L  F FQ EIARKAL AS
Sbjct: 96  SHMDDPDIDNPIA---ESSETLTNVDQSKVDTLISFGFQEEIARKALKAS 142



 Score = 33.9 bits (76), Expect(3) = 1e-26
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +2

Query: 257 GGNIEKGTDWIFTHPEVS 310
           GG+IEK TDWIFT P+ S
Sbjct: 143 GGDIEKATDWIFTSPDAS 160