BLASTX nr result

ID: Coptis24_contig00035882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035882
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like...   191   4e-47
emb|CBI25718.3| unnamed protein product [Vitis vinifera]              191   4e-47
ref|XP_004160150.1| PREDICTED: probable beta-D-xylosidase 6-like...   181   5e-44
ref|XP_004143540.1| PREDICTED: probable beta-D-xylosidase 6-like...   181   5e-44
ref|XP_003612944.1| Beta-D-xylosidase [Medicago truncatula] gi|3...   176   1e-42

>ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like [Vitis vinifera]
          Length = 789

 Score =  191 bits (486), Expect = 4e-47
 Identities = 92/112 (82%), Positives = 102/112 (91%)
 Frame = +2

Query: 2   FCNTSLPISTRAQSIISLLTLPEKITQLSNNASPIARLGIPAYQWWSESLHGIATNGPGV 181
           FCNTSLPISTRAQS++SLLTL EKI QLS+ A+ I RL IPAY+WWSESLHGIATNGPGV
Sbjct: 42  FCNTSLPISTRAQSLVSLLTLSEKIQQLSDEAAAIPRLYIPAYEWWSESLHGIATNGPGV 101

Query: 182 SFNGTVNSATMFPQVLVTAASFNTSLWFEIGATVAVEARAMYNVGQAGLTFW 337
           SFNGTV++AT FPQVL+TAASFN SLWF IG+ +AVEARAMYNVGQAGLTFW
Sbjct: 102 SFNGTVSAATSFPQVLLTAASFNRSLWFSIGSAIAVEARAMYNVGQAGLTFW 153


>emb|CBI25718.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  191 bits (486), Expect = 4e-47
 Identities = 92/112 (82%), Positives = 102/112 (91%)
 Frame = +2

Query: 2   FCNTSLPISTRAQSIISLLTLPEKITQLSNNASPIARLGIPAYQWWSESLHGIATNGPGV 181
           FCNTSLPISTRAQS++SLLTL EKI QLS+ A+ I RL IPAY+WWSESLHGIATNGPGV
Sbjct: 42  FCNTSLPISTRAQSLVSLLTLSEKIQQLSDEAAAIPRLYIPAYEWWSESLHGIATNGPGV 101

Query: 182 SFNGTVNSATMFPQVLVTAASFNTSLWFEIGATVAVEARAMYNVGQAGLTFW 337
           SFNGTV++AT FPQVL+TAASFN SLWF IG+ +AVEARAMYNVGQAGLTFW
Sbjct: 102 SFNGTVSAATSFPQVLLTAASFNRSLWFSIGSAIAVEARAMYNVGQAGLTFW 153


>ref|XP_004160150.1| PREDICTED: probable beta-D-xylosidase 6-like, partial [Cucumis
           sativus]
          Length = 767

 Score =  181 bits (459), Expect = 5e-44
 Identities = 86/112 (76%), Positives = 96/112 (85%)
 Frame = +2

Query: 2   FCNTSLPISTRAQSIISLLTLPEKITQLSNNASPIARLGIPAYQWWSESLHGIATNGPGV 181
           FCN SL  + RAQS++SLLTL EKI QLSNNAS I RLGIP+YQWWSE LHGIATNGPGV
Sbjct: 22  FCNRSLSFTARAQSLVSLLTLDEKIQQLSNNASSIPRLGIPSYQWWSEGLHGIATNGPGV 81

Query: 182 SFNGTVNSATMFPQVLVTAASFNTSLWFEIGATVAVEARAMYNVGQAGLTFW 337
           SFNG++ SAT FPQVLVTAASFN +LWF IG+ +AVEARAM+NVGQ GLT W
Sbjct: 82  SFNGSITSATSFPQVLVTAASFNRTLWFLIGSAIAVEARAMFNVGQCGLTIW 133


>ref|XP_004143540.1| PREDICTED: probable beta-D-xylosidase 6-like [Cucumis sativus]
          Length = 777

 Score =  181 bits (459), Expect = 5e-44
 Identities = 86/112 (76%), Positives = 96/112 (85%)
 Frame = +2

Query: 2   FCNTSLPISTRAQSIISLLTLPEKITQLSNNASPIARLGIPAYQWWSESLHGIATNGPGV 181
           FCN SL  + RAQS++SLLTL EKI QLSNNAS I RLGIP+YQWWSE LHGIATNGPGV
Sbjct: 32  FCNRSLSFTARAQSLVSLLTLDEKIQQLSNNASSIPRLGIPSYQWWSEGLHGIATNGPGV 91

Query: 182 SFNGTVNSATMFPQVLVTAASFNTSLWFEIGATVAVEARAMYNVGQAGLTFW 337
           SFNG++ SAT FPQVLVTAASFN +LWF IG+ +AVEARAM+NVGQ GLT W
Sbjct: 92  SFNGSITSATSFPQVLVTAASFNRTLWFLIGSAIAVEARAMFNVGQCGLTIW 143


>ref|XP_003612944.1| Beta-D-xylosidase [Medicago truncatula] gi|355514279|gb|AES95902.1|
           Beta-D-xylosidase [Medicago truncatula]
          Length = 783

 Score =  176 bits (447), Expect = 1e-42
 Identities = 84/112 (75%), Positives = 96/112 (85%)
 Frame = +2

Query: 2   FCNTSLPISTRAQSIISLLTLPEKITQLSNNASPIARLGIPAYQWWSESLHGIATNGPGV 181
           FCN SLPISTR  S+ISLLTL +KI QLSN AS I+ LGIP+YQWWSE+LHGIATNGPGV
Sbjct: 42  FCNISLPISTRTTSLISLLTLSDKINQLSNTASSISHLGIPSYQWWSEALHGIATNGPGV 101

Query: 182 SFNGTVNSATMFPQVLVTAASFNTSLWFEIGATVAVEARAMYNVGQAGLTFW 337
           +FNG+V SAT FPQV+V+AA+FN SLWF IG  V VE RAM+NVGQAGL+FW
Sbjct: 102 NFNGSVKSATNFPQVIVSAAAFNRSLWFLIGYAVGVEGRAMFNVGQAGLSFW 153


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