BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035877
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera]    72   6e-11
emb|CAN82037.1| hypothetical protein VITISV_033902 [Vitis vinifera]    70   2e-10
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    70   2e-10
emb|CAN60702.1| hypothetical protein VITISV_015869 [Vitis vinifera]    69   5e-10
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript...    69   5e-10

>emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera]
          Length = 1971

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
 Frame = -1

Query: 260  SFTNYFLYTWGFSYKWISVI*FCISTVTYEIFLNGFPLQTSKPNRGLIQGDPLSPYLFI- 84
            +F  + L + GF  KWI  I +CIST T+ + +NG P      +RGL QGDPLSPYLF+ 
Sbjct: 897  NFLLFVLQSMGFGEKWIGWISWCISTATFSVLINGTPEGYFNSSRGLRQGDPLSPYLFVL 956

Query: 83   -SEALSRLLHK 54
              EALSRL+H+
Sbjct: 957  GMEALSRLIHR 967


>emb|CAN82037.1| hypothetical protein VITISV_033902 [Vitis vinifera]
          Length = 1109

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
 Frame = -1

Query: 260 SFTNYFLYTWGFSYKWISVI*FCISTVTYEIFLNGFPLQTSKPNRGLIQGDPLSPYLFI- 84
           +F    L + GF  KWI  I +CIST T+ + +NG P      +RGL QGDP+SPYLF+ 
Sbjct: 487 NFLMVVLQSMGFGEKWIGWISWCISTATFSVLINGTPEGFFNSSRGLRQGDPISPYLFVI 546

Query: 83  -SEALSRLLHK 54
             EALSRL+H+
Sbjct: 547 GMEALSRLIHR 557


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
 Frame = -1

Query: 260  SFTNYFLYTWGFSYKWISVI*FCISTVTYEIFLNGFPLQTSKPNRGLIQGDPLSPYLFI- 84
            +F    +   GF+ +W+  I  C+++V+YE+ +NG P     P+RG+ QGDPLSPYLF+ 
Sbjct: 949  NFLEKVMIQLGFAPRWVKWIMTCVTSVSYEVLINGSPYGKIFPSRGIRQGDPLSPYLFLF 1008

Query: 83   -SEALSRLLHKPRVEKNINLPKYLK 12
             +E LS +L K  V K I+  K  K
Sbjct: 1009 CAEVLSNMLRKAEVNKQIHGMKITK 1033


>emb|CAN60702.1| hypothetical protein VITISV_015869 [Vitis vinifera]
          Length = 3028

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
 Frame = -1

Query: 257  FTNYFLYTWGFSYKWISVI*FCISTVTYEIFLNGFPLQTSKPNRGLIQGDPLSPYLFI-- 84
            F  + L + GF  KWI  I +CIST T+ + +NG P      +RGL QGDPLSPYLF+  
Sbjct: 2452 FLIFVLQSMGFGEKWIGWISWCISTATFSVLINGTPEGYFNSSRGLRQGDPLSPYLFVIG 2511

Query: 83   SEALSRLLHK 54
             EALSRL+++
Sbjct: 2512 MEALSRLINR 2521


>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 400

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
 Frame = -1

Query: 260 SFTNYFLYTWGFSYKWISVI*FCISTVTYEIFLNGFPLQTSKPNRGLIQGDPLSPYLFI- 84
           SF    +   GF+ KW+  I FCIS+V+Y+I LNG P    KP+RG+ QGDP+SP+LFI 
Sbjct: 168 SFLRALMLKMGFAQKWVDWIIFCISSVSYKILLNGSPKGFIKPSRGIRQGDPISPFLFIL 227

Query: 83  -SEAL 72
            +EAL
Sbjct: 228 CTEAL 232