BLASTX nr result
ID: Coptis24_contig00035861
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035861 (350 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAX33323.1| secondary cell wall-related glycosyltransferase f... 116 2e-24 ref|XP_003624720.1| Xylosyltransferase [Medicago truncatula] gi|... 108 6e-22 ref|XP_003554053.1| PREDICTED: xylosyltransferase 1-like [Glycin... 100 2e-19 ref|XP_002319193.1| predicted protein [Populus trichocarpa] gi|2... 99 5e-19 gb|ACU23596.1| unknown [Glycine max] 98 6e-19 >gb|AAX33323.1| secondary cell wall-related glycosyltransferase family 14 [Populus tremula x Populus tremuloides] Length = 397 Score = 116 bits (291), Expect = 2e-24 Identities = 54/90 (60%), Positives = 68/90 (75%) Frame = -3 Query: 270 PALLTRPISRLQAVNTLKILKPIEPYPVTFAYLISASKGDLNQLKRTLYALYHPGNYYLL 91 P LT PI++ V L +LK ++PYPVTFAYLISAS+GD +L R L ALYHPGNYYL+ Sbjct: 23 PTKLTTPIAKYNPVINLNMLKDLKPYPVTFAYLISASRGDAKRLMRVLKALYHPGNYYLI 82 Query: 90 HMDQGAPDTEHLDLAQFVSGNPVFAEVGNV 1 H+D AP+ EH ++A+FVS +PVF VGNV Sbjct: 83 HVDSDAPEKEHREIAEFVSSDPVFGLVGNV 112 >ref|XP_003624720.1| Xylosyltransferase [Medicago truncatula] gi|355499735|gb|AES80938.1| Xylosyltransferase [Medicago truncatula] Length = 399 Score = 108 bits (269), Expect = 6e-22 Identities = 53/92 (57%), Positives = 68/92 (73%), Gaps = 2/92 (2%) Frame = -3 Query: 270 PALLTRPISRLQ--AVNTLKILKPIEPYPVTFAYLISASKGDLNQLKRTLYALYHPGNYY 97 P LT IS L+ A++ +L+ YP+TFAYLISASKGD +LKR L LYHP NYY Sbjct: 23 PTRLTLQISTLKPSAMDYFNVLRTNITYPITFAYLISASKGDTLKLKRLLKVLYHPNNYY 82 Query: 96 LLHMDQGAPDTEHLDLAQFVSGNPVFAEVGNV 1 L+HMD GAPD EH D+A++V+ +PVF++VGNV Sbjct: 83 LIHMDYGAPDAEHKDVAEYVANDPVFSQVGNV 114 >ref|XP_003554053.1| PREDICTED: xylosyltransferase 1-like [Glycine max] Length = 399 Score = 100 bits (248), Expect = 2e-19 Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 2/92 (2%) Frame = -3 Query: 270 PALLTRPISRLQA-VNTLKIL-KPIEPYPVTFAYLISASKGDLNQLKRTLYALYHPGNYY 97 P LT S L+ VN + K + YPVTFAYLISASKGD+ +LKR + LYHPGNYY Sbjct: 23 PTRLTVQFSTLRPPVNYFSVPPKSSKAYPVTFAYLISASKGDVVKLKRLMKVLYHPGNYY 82 Query: 96 LLHMDQGAPDTEHLDLAQFVSGNPVFAEVGNV 1 L+H+D GAP EH +A+FV+ +PVF +VGNV Sbjct: 83 LIHVDYGAPQAEHRAVAEFVASDPVFGQVGNV 114 >ref|XP_002319193.1| predicted protein [Populus trichocarpa] gi|222857569|gb|EEE95116.1| predicted protein [Populus trichocarpa] Length = 363 Score = 98.6 bits (244), Expect = 5e-19 Identities = 44/66 (66%), Positives = 53/66 (80%) Frame = -3 Query: 198 PYPVTFAYLISASKGDLNQLKRTLYALYHPGNYYLLHMDQGAPDTEHLDLAQFVSGNPVF 19 PYPVTF YLISAS+GD +L R L ALYHPGNYYL+H+D AP+ EH ++A+FVS +PVF Sbjct: 36 PYPVTFTYLISASRGDAKRLTRVLKALYHPGNYYLIHVDADAPEKEHREIAEFVSSDPVF 95 Query: 18 AEVGNV 1 VGNV Sbjct: 96 GLVGNV 101 >gb|ACU23596.1| unknown [Glycine max] Length = 167 Score = 98.2 bits (243), Expect = 6e-19 Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 2/92 (2%) Frame = -3 Query: 270 PALLTRPISRLQAVNTLKILKP--IEPYPVTFAYLISASKGDLNQLKRTLYALYHPGNYY 97 P LT S L+ + P YPV+FAYLISASKGD+ +LKR + LYHPGNYY Sbjct: 23 PTRLTMQFSTLRPPGNYFSVPPNSSRAYPVSFAYLISASKGDVVKLKRLMRVLYHPGNYY 82 Query: 96 LLHMDQGAPDTEHLDLAQFVSGNPVFAEVGNV 1 L+H+D GAP EH +A+FV+ +PVF +VGNV Sbjct: 83 LIHVDYGAPQAEHKAVAEFVASDPVFGQVGNV 114