BLASTX nr result

ID: Coptis24_contig00035861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035861
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX33323.1| secondary cell wall-related glycosyltransferase f...   116   2e-24
ref|XP_003624720.1| Xylosyltransferase [Medicago truncatula] gi|...   108   6e-22
ref|XP_003554053.1| PREDICTED: xylosyltransferase 1-like [Glycin...   100   2e-19
ref|XP_002319193.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
gb|ACU23596.1| unknown [Glycine max]                                   98   6e-19

>gb|AAX33323.1| secondary cell wall-related glycosyltransferase family 14 [Populus
           tremula x Populus tremuloides]
          Length = 397

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/90 (60%), Positives = 68/90 (75%)
 Frame = -3

Query: 270 PALLTRPISRLQAVNTLKILKPIEPYPVTFAYLISASKGDLNQLKRTLYALYHPGNYYLL 91
           P  LT PI++   V  L +LK ++PYPVTFAYLISAS+GD  +L R L ALYHPGNYYL+
Sbjct: 23  PTKLTTPIAKYNPVINLNMLKDLKPYPVTFAYLISASRGDAKRLMRVLKALYHPGNYYLI 82

Query: 90  HMDQGAPDTEHLDLAQFVSGNPVFAEVGNV 1
           H+D  AP+ EH ++A+FVS +PVF  VGNV
Sbjct: 83  HVDSDAPEKEHREIAEFVSSDPVFGLVGNV 112


>ref|XP_003624720.1| Xylosyltransferase [Medicago truncatula]
           gi|355499735|gb|AES80938.1| Xylosyltransferase [Medicago
           truncatula]
          Length = 399

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/92 (57%), Positives = 68/92 (73%), Gaps = 2/92 (2%)
 Frame = -3

Query: 270 PALLTRPISRLQ--AVNTLKILKPIEPYPVTFAYLISASKGDLNQLKRTLYALYHPGNYY 97
           P  LT  IS L+  A++   +L+    YP+TFAYLISASKGD  +LKR L  LYHP NYY
Sbjct: 23  PTRLTLQISTLKPSAMDYFNVLRTNITYPITFAYLISASKGDTLKLKRLLKVLYHPNNYY 82

Query: 96  LLHMDQGAPDTEHLDLAQFVSGNPVFAEVGNV 1
           L+HMD GAPD EH D+A++V+ +PVF++VGNV
Sbjct: 83  LIHMDYGAPDAEHKDVAEYVANDPVFSQVGNV 114


>ref|XP_003554053.1| PREDICTED: xylosyltransferase 1-like [Glycine max]
          Length = 399

 Score =  100 bits (248), Expect = 2e-19
 Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 2/92 (2%)
 Frame = -3

Query: 270 PALLTRPISRLQA-VNTLKIL-KPIEPYPVTFAYLISASKGDLNQLKRTLYALYHPGNYY 97
           P  LT   S L+  VN   +  K  + YPVTFAYLISASKGD+ +LKR +  LYHPGNYY
Sbjct: 23  PTRLTVQFSTLRPPVNYFSVPPKSSKAYPVTFAYLISASKGDVVKLKRLMKVLYHPGNYY 82

Query: 96  LLHMDQGAPDTEHLDLAQFVSGNPVFAEVGNV 1
           L+H+D GAP  EH  +A+FV+ +PVF +VGNV
Sbjct: 83  LIHVDYGAPQAEHRAVAEFVASDPVFGQVGNV 114


>ref|XP_002319193.1| predicted protein [Populus trichocarpa] gi|222857569|gb|EEE95116.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 44/66 (66%), Positives = 53/66 (80%)
 Frame = -3

Query: 198 PYPVTFAYLISASKGDLNQLKRTLYALYHPGNYYLLHMDQGAPDTEHLDLAQFVSGNPVF 19
           PYPVTF YLISAS+GD  +L R L ALYHPGNYYL+H+D  AP+ EH ++A+FVS +PVF
Sbjct: 36  PYPVTFTYLISASRGDAKRLTRVLKALYHPGNYYLIHVDADAPEKEHREIAEFVSSDPVF 95

Query: 18  AEVGNV 1
             VGNV
Sbjct: 96  GLVGNV 101


>gb|ACU23596.1| unknown [Glycine max]
          Length = 167

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 49/92 (53%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
 Frame = -3

Query: 270 PALLTRPISRLQAVNTLKILKP--IEPYPVTFAYLISASKGDLNQLKRTLYALYHPGNYY 97
           P  LT   S L+       + P     YPV+FAYLISASKGD+ +LKR +  LYHPGNYY
Sbjct: 23  PTRLTMQFSTLRPPGNYFSVPPNSSRAYPVSFAYLISASKGDVVKLKRLMRVLYHPGNYY 82

Query: 96  LLHMDQGAPDTEHLDLAQFVSGNPVFAEVGNV 1
           L+H+D GAP  EH  +A+FV+ +PVF +VGNV
Sbjct: 83  LIHVDYGAPQAEHKAVAEFVASDPVFGQVGNV 114