BLASTX nr result

ID: Coptis24_contig00035857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035857
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524055.1| Spotted leaf protein, putative [Ricinus comm...   153   1e-35
ref|XP_002265057.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   151   5e-35
ref|XP_002308324.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002275220.2| PREDICTED: E3 ubiquitin-protein ligase PUB24...   146   2e-33
emb|CAN80214.1| hypothetical protein VITISV_017908 [Vitis vinifera]   145   4e-33

>ref|XP_002524055.1| Spotted leaf protein, putative [Ricinus communis]
           gi|223536623|gb|EEF38265.1| Spotted leaf protein,
           putative [Ricinus communis]
          Length = 403

 Score =  153 bits (387), Expect = 1e-35
 Identities = 73/105 (69%), Positives = 84/105 (80%)
 Frame = -3

Query: 315 SIEQWLFADPNTCCPVTKQPLPKDFDLTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLN 136
           SIEQWLF   NT CPVTKQ LPKDFDLTPNHTLRRLIQAWC+ NA++G+DRIPTPK  L+
Sbjct: 35  SIEQWLFTTKNTICPVTKQSLPKDFDLTPNHTLRRLIQAWCIDNASSGIDRIPTPKPCLD 94

Query: 135 NIHILKLLQDLWCPQLQSKALRRLVSLAAENERNRKCMMEAGVAK 1
             H+LKL++DL  P+LQ K L +L  LAAEN+RNRK M E GV K
Sbjct: 95  KFHLLKLIKDLHLPRLQMKTLVQLELLAAENDRNRKYMAETGVPK 139


>ref|XP_002265057.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera]
          Length = 406

 Score =  151 bits (382), Expect = 5e-35
 Identities = 73/105 (69%), Positives = 84/105 (80%)
 Frame = -3

Query: 315 SIEQWLFADPNTCCPVTKQPLPKDFDLTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLN 136
           SIE WLF   NTC PVTKQPLP D DLTPNHTLRRLIQ+WC  NA+NGV RIPTPK+PL 
Sbjct: 35  SIENWLFKGNNTC-PVTKQPLPPDSDLTPNHTLRRLIQSWCTENASNGVVRIPTPKAPLT 93

Query: 135 NIHILKLLQDLWCPQLQSKALRRLVSLAAENERNRKCMMEAGVAK 1
             H++KL+++LW PQLQ K LR+L  LA ENERNR+ M+EAGV K
Sbjct: 94  KSHVVKLVKELWVPQLQLKTLRKLELLAMENERNRRYMVEAGVIK 138


>ref|XP_002308324.1| predicted protein [Populus trichocarpa] gi|222854300|gb|EEE91847.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  150 bits (379), Expect = 1e-34
 Identities = 72/105 (68%), Positives = 83/105 (79%)
 Frame = -3

Query: 315 SIEQWLFADPNTCCPVTKQPLPKDFDLTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLN 136
           SIE WLF   NT CPVTKQPL KD DLTPNHTLRRLIQAWC  NA++GVDRIPTPK  L+
Sbjct: 35  SIEHWLFTSQNTACPVTKQPLQKDLDLTPNHTLRRLIQAWCTENASHGVDRIPTPKPCLD 94

Query: 135 NIHILKLLQDLWCPQLQSKALRRLVSLAAENERNRKCMMEAGVAK 1
             H+LKL+++L   +LQ K L RL  LAAENERNRKCM++AG+ K
Sbjct: 95  KAHVLKLIKNLSHHELQIKTLTRLELLAAENERNRKCMVDAGLPK 139


>ref|XP_002275220.2| PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Vitis vinifera]
          Length = 466

 Score =  146 bits (368), Expect = 2e-33
 Identities = 67/105 (63%), Positives = 81/105 (77%)
 Frame = -3

Query: 315 SIEQWLFADPNTCCPVTKQPLPKDFDLTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLN 136
           SIEQWL    +T CPVTKQPL +DF LTPNHTLRRLIQAWC  NA NGVDRIPTPK+PL+
Sbjct: 41  SIEQWLLTAKDTTCPVTKQPLERDFVLTPNHTLRRLIQAWCADNATNGVDRIPTPKTPLD 100

Query: 135 NIHILKLLQDLWCPQLQSKALRRLVSLAAENERNRKCMMEAGVAK 1
             H++KL++DL   QL  K L+++ +L  +NERNR CM +AG AK
Sbjct: 101 RTHVVKLIRDLGVAQLYLKTLQKMEALTRDNERNRNCMADAGAAK 145


>emb|CAN80214.1| hypothetical protein VITISV_017908 [Vitis vinifera]
          Length = 437

 Score =  145 bits (365), Expect = 4e-33
 Identities = 66/105 (62%), Positives = 81/105 (77%)
 Frame = -3

Query: 315 SIEQWLFADPNTCCPVTKQPLPKDFDLTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLN 136
           SIEQWL    +T CPVTKQPL +DF LTPNHTLRRLIQAWC  NA NGVD+IPTPK+PL+
Sbjct: 41  SIEQWLLTAKDTTCPVTKQPLERDFVLTPNHTLRRLIQAWCAANATNGVDQIPTPKTPLD 100

Query: 135 NIHILKLLQDLWCPQLQSKALRRLVSLAAENERNRKCMMEAGVAK 1
             H++KL++DL   QL  K L+++ +L  +NERNR CM +AG AK
Sbjct: 101 RTHVVKLIRDLGVAQLYLKTLQKMEALTRDNERNRNCMADAGAAK 145


Top