BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035846
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24229.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containi...    88   8e-16
emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]    88   8e-16
ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containi...    76   3e-12
ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containi...    75   4e-12

>emb|CBI24229.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 37/64 (57%), Positives = 53/64 (82%)
 Frame = -2

Query: 287 DVRKTRLKMKELGLKINPGCSWIEVDKRLNSFFVEDKSHPEVELIHECLANFIRHMDEEE 108
           +VRK RLK+KELGLK NPGCSWIEV KR++ F VEDKSHP+ ++I+EC++    H+++ +
Sbjct: 484 EVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKYQ 543

Query: 107 LLSY 96
           +LS+
Sbjct: 544 VLSF 547


>ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 37/64 (57%), Positives = 53/64 (82%)
 Frame = -2

Query: 287 DVRKTRLKMKELGLKINPGCSWIEVDKRLNSFFVEDKSHPEVELIHECLANFIRHMDEEE 108
           +VRK RLK+KELGLK NPGCSWIEV KR++ F VEDKSHP+ ++I+EC++    H+++ +
Sbjct: 631 EVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKYQ 690

Query: 107 LLSY 96
           +LS+
Sbjct: 691 VLSF 694


>emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 37/64 (57%), Positives = 53/64 (82%)
 Frame = -2

Query: 287  DVRKTRLKMKELGLKINPGCSWIEVDKRLNSFFVEDKSHPEVELIHECLANFIRHMDEEE 108
            +VRK RLK+KELGLK NPGCSWIEV KR++ F VEDKSHP+ ++I+EC++    H+++ +
Sbjct: 823  EVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKYQ 882

Query: 107  LLSY 96
            +LS+
Sbjct: 883  VLSF 886


>ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
           gi|449481162|ref|XP_004156100.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/61 (55%), Positives = 47/61 (77%)
 Frame = -2

Query: 287 DVRKTRLKMKELGLKINPGCSWIEVDKRLNSFFVEDKSHPEVELIHECLANFIRHMDEEE 108
           +VRK R KMKELGLK +PGCSWIE+++R++ FF EDKS+P  + ++ECL     HM++ E
Sbjct: 631 EVRKVRRKMKELGLKKSPGCSWIEINQRIHPFFAEDKSNPLADGVYECLNILGCHMEKNE 690

Query: 107 L 105
           L
Sbjct: 691 L 691


>ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 33/59 (55%), Positives = 45/59 (76%)
 Frame = -2

Query: 287 DVRKTRLKMKELGLKINPGCSWIEVDKRLNSFFVEDKSHPEVELIHECLANFIRHMDEE 111
           +VR  R KMKELGLK NPGCSWIE+++++  FFVED SH  +EL+ +CL+    HM++E
Sbjct: 631 EVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMEDE 689