BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035828
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16436.3| unnamed protein product [Vitis vinifera]              147   7e-34
ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containi...   147   7e-34
emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]   147   7e-34
ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containi...   142   2e-32
ref|XP_003619639.1| Pentatricopeptide repeat-containing protein ...   139   2e-31

>emb|CBI16436.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score =  147 bits (372), Expect = 7e-34
 Identities = 69/102 (67%), Positives = 85/102 (83%)
 Frame = -2

Query: 325 LEQGKWIHVYIDREGIKLRGQLLASLIDMYAKCGEIKFAYKVFNSPDSCKQALWPWNAMI 146
           L+QG+WIHVYID+  IK+  +LLASL+DMYAKCGEI FA KVF+     K  +WPWNAMI
Sbjct: 219 LDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMI 278

Query: 145 GGFAMHGWSKEAIDLFERMRTMLHIAPNKITFVSLLNACSHG 20
           GG+AMHG SKEAIDLFE+M+ +  ++PNK+TFV+LLNACSHG
Sbjct: 279 GGYAMHGKSKEAIDLFEQMK-VEKVSPNKVTFVALLNACSHG 319


>ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 624

 Score =  147 bits (372), Expect = 7e-34
 Identities = 69/102 (67%), Positives = 85/102 (83%)
 Frame = -2

Query: 325 LEQGKWIHVYIDREGIKLRGQLLASLIDMYAKCGEIKFAYKVFNSPDSCKQALWPWNAMI 146
           L+QG+WIHVYID+  IK+  +LLASL+DMYAKCGEI FA KVF+     K  +WPWNAMI
Sbjct: 265 LDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMI 324

Query: 145 GGFAMHGWSKEAIDLFERMRTMLHIAPNKITFVSLLNACSHG 20
           GG+AMHG SKEAIDLFE+M+ +  ++PNK+TFV+LLNACSHG
Sbjct: 325 GGYAMHGKSKEAIDLFEQMK-VEKVSPNKVTFVALLNACSHG 365


>emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
          Length = 539

 Score =  147 bits (372), Expect = 7e-34
 Identities = 69/102 (67%), Positives = 85/102 (83%)
 Frame = -2

Query: 325 LEQGKWIHVYIDREGIKLRGQLLASLIDMYAKCGEIKFAYKVFNSPDSCKQALWPWNAMI 146
           L+QG+WIHVYID+  IK+  +LLASL+DMYAKCGEI FA KVF+     K  +WPWNAMI
Sbjct: 180 LDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMI 239

Query: 145 GGFAMHGWSKEAIDLFERMRTMLHIAPNKITFVSLLNACSHG 20
           GG+AMHG SKEAIDLFE+M+ +  ++PNK+TFV+LLNACSHG
Sbjct: 240 GGYAMHGKSKEAIDLFEQMK-VEKVSPNKVTFVALLNACSHG 280


>ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
           gi|449516005|ref|XP_004165038.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 609

 Score =  142 bits (359), Expect = 2e-32
 Identities = 64/102 (62%), Positives = 86/102 (84%)
 Frame = -2

Query: 325 LEQGKWIHVYIDREGIKLRGQLLASLIDMYAKCGEIKFAYKVFNSPDSCKQALWPWNAMI 146
           L+QG+W+HVYI +  I++  +LLA LIDMYAKCGE++FA K+FNS    K+ +WPWNAMI
Sbjct: 250 LDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKVWPWNAMI 309

Query: 145 GGFAMHGWSKEAIDLFERMRTMLHIAPNKITFVSLLNACSHG 20
           GGFA+HG SKEAI++FE+M+ +  ++PNK+TFV+LLNACSHG
Sbjct: 310 GGFAVHGKSKEAIEVFEQMK-IEKVSPNKVTFVALLNACSHG 350


>ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355494654|gb|AES75857.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1182

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/103 (64%), Positives = 84/103 (81%)
 Frame = -2

Query: 325 LEQGKWIHVYIDREGIKLRGQLLASLIDMYAKCGEIKFAYKVFNSPDSCKQALWPWNAMI 146
           L+QGKWIHVYI R+ IK+  +LLASLIDMYAKCGEI  A  VF+     K+ +WPWNAMI
Sbjct: 426 LDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHE-HKVKRKVWPWNAMI 484

Query: 145 GGFAMHGWSKEAIDLFERMRTMLHIAPNKITFVSLLNACSHGY 17
           GGFAMHG  +EAI++FE+M+ +  ++PNK+TF++LLNACSHGY
Sbjct: 485 GGFAMHGKPEEAINVFEKMK-VEKVSPNKVTFIALLNACSHGY 526