BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035800
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28838.3| unnamed protein product [Vitis vinifera]              190   1e-46
ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like ...   190   1e-46
ref|XP_002881232.1| predicted protein [Arabidopsis lyrata subsp....   188   3e-46
ref|XP_002529335.1| Condensin complex subunit, putative [Ricinus...   186   2e-45
ref|NP_180818.2| condensin complex subunit 2 [Arabidopsis thalia...   183   1e-44

>emb|CBI28838.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score =  190 bits (482), Expect = 1e-46
 Identities = 84/126 (66%), Positives = 101/126 (80%)
 Frame = -3

Query: 405 EFLFLGLGFSSNTNAWAGPDHWKFRKVKGPEGNTVTESGSTVRAKKPNCRKQVEPDLNFT 226
           ++LFL LGF+S  NAWAGPDHWK+RKVKGPE +  TE GS +  K+   +KQ EPD++FT
Sbjct: 391 DYLFLSLGFASKQNAWAGPDHWKYRKVKGPEDDPATEKGSPLTTKRARGKKQAEPDIDFT 450

Query: 225 NCLEKEMPDIFAPPKNLKSLLLPANRVPCKTTLPEDCHYQPENLVKLFLLPNTLCLGKRA 46
             L+KE+ D+FAPPKN KSL LPANR PC T LPEDCHYQPENLVKLFLLPN +CLG+R 
Sbjct: 451 KALDKEISDVFAPPKNPKSLFLPANRAPCNTKLPEDCHYQPENLVKLFLLPNIMCLGRRR 510

Query: 45  RKPSDD 28
           R+ SD+
Sbjct: 511 RRFSDE 516


>ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like [Vitis vinifera]
          Length = 674

 Score =  190 bits (482), Expect = 1e-46
 Identities = 84/126 (66%), Positives = 101/126 (80%)
 Frame = -3

Query: 405 EFLFLGLGFSSNTNAWAGPDHWKFRKVKGPEGNTVTESGSTVRAKKPNCRKQVEPDLNFT 226
           ++LFL LGF+S  NAWAGPDHWK+RKVKGPE +  TE GS +  K+   +KQ EPD++FT
Sbjct: 391 DYLFLSLGFASKQNAWAGPDHWKYRKVKGPEDDPATEKGSPLTTKRARGKKQAEPDIDFT 450

Query: 225 NCLEKEMPDIFAPPKNLKSLLLPANRVPCKTTLPEDCHYQPENLVKLFLLPNTLCLGKRA 46
             L+KE+ D+FAPPKN KSL LPANR PC T LPEDCHYQPENLVKLFLLPN +CLG+R 
Sbjct: 451 KALDKEISDVFAPPKNPKSLFLPANRAPCNTKLPEDCHYQPENLVKLFLLPNIMCLGRRR 510

Query: 45  RKPSDD 28
           R+ SD+
Sbjct: 511 RRFSDE 516


>ref|XP_002881232.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327071|gb|EFH57491.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 704

 Score =  188 bits (478), Expect = 3e-46
 Identities = 85/133 (63%), Positives = 105/133 (78%)
 Frame = -3

Query: 405 EFLFLGLGFSSNTNAWAGPDHWKFRKVKGPEGNTVTESGSTVRAKKPNCRKQVEPDLNFT 226
           ++LFL LG SS  N+WAGPDHWK+RK KGP+  + +E+ S+  AKK   +KQ EP+L+FT
Sbjct: 421 DYLFLSLGISSKQNSWAGPDHWKYRKTKGPDVQSASENKSSPPAKKTRKKKQAEPELDFT 480

Query: 225 NCLEKEMPDIFAPPKNLKSLLLPANRVPCKTTLPEDCHYQPENLVKLFLLPNTLCLGKRA 46
             LE+EMPDIFAPPKN KSLLLPA+R PC+T LPEDCHYQPENL+KLFLLPN +CLG+R 
Sbjct: 481 KALEEEMPDIFAPPKNPKSLLLPASRTPCQTKLPEDCHYQPENLIKLFLLPNVMCLGRRR 540

Query: 45  RKPSDDKFRTEGD 7
           RK S +  R + D
Sbjct: 541 RKSSGETSRQQHD 553


>ref|XP_002529335.1| Condensin complex subunit, putative [Ricinus communis]
           gi|223531206|gb|EEF33052.1| Condensin complex subunit,
           putative [Ricinus communis]
          Length = 584

 Score =  186 bits (472), Expect = 2e-45
 Identities = 83/125 (66%), Positives = 98/125 (78%)
 Frame = -3

Query: 402 FLFLGLGFSSNTNAWAGPDHWKFRKVKGPEGNTVTESGSTVRAKKPNCRKQVEPDLNFTN 223
           +L   LGF+S  NAWAGPDHWK+RK KG E N+ TE GS V AKKP  +KQ E D++FT 
Sbjct: 373 YLSFSLGFTSKQNAWAGPDHWKYRKAKGLEDNSTTEEGSPVTAKKPKTKKQAELDIDFTK 432

Query: 222 CLEKEMPDIFAPPKNLKSLLLPANRVPCKTTLPEDCHYQPENLVKLFLLPNTLCLGKRAR 43
            L++ +PD+F PPKN KSLLLPA RVPC TTLPEDCHYQPE+LVKLFLLPN +CLGKR R
Sbjct: 433 ALDENLPDVFTPPKNPKSLLLPATRVPCSTTLPEDCHYQPEDLVKLFLLPNIMCLGKRRR 492

Query: 42  KPSDD 28
           +  D+
Sbjct: 493 RSQDE 497


>ref|NP_180818.2| condensin complex subunit 2 [Arabidopsis thaliana]
           gi|75217252|sp|Q564K3.1|CND2_ARATH RecName:
           Full=Condensin complex subunit 2; AltName:
           Full=Chromosome-associated protein H; Short=AtCAP-H;
           AltName: Full=Non-SMC condensin I complex subunit H;
           AltName: Full=Protein EMBRYO DEFECTIVE 2795
           gi|62533251|dbj|BAD95575.1| chromosome associate protein
           subunit H [Arabidopsis thaliana]
           gi|330253609|gb|AEC08703.1| condensin complex subunit 2
           [Arabidopsis thaliana]
          Length = 671

 Score =  183 bits (464), Expect = 1e-44
 Identities = 83/133 (62%), Positives = 102/133 (76%)
 Frame = -3

Query: 405 EFLFLGLGFSSNTNAWAGPDHWKFRKVKGPEGNTVTESGSTVRAKKPNCRKQVEPDLNFT 226
           ++LFL LG SS  N+WAGPDHWK+RK KGP+    +E  S+  AKK   +KQ EP+L+F 
Sbjct: 391 DYLFLSLGISSKQNSWAGPDHWKYRKTKGPDVQPASEIKSSPPAKKTRKKKQAEPELDFA 450

Query: 225 NCLEKEMPDIFAPPKNLKSLLLPANRVPCKTTLPEDCHYQPENLVKLFLLPNTLCLGKRA 46
             LE+EMPDIFAPPKN K+LLLPA+R PC+T LPEDCHYQPENL+KLFLLPN +CLG+R 
Sbjct: 451 KALEEEMPDIFAPPKNPKTLLLPASRTPCQTKLPEDCHYQPENLIKLFLLPNVMCLGRRR 510

Query: 45  RKPSDDKFRTEGD 7
           RK S +  R + D
Sbjct: 511 RKNSGETSRQQPD 523