BLASTX nr result

ID: Coptis24_contig00035791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035791
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16457.3| unnamed protein product [Vitis vinifera]              145   4e-33
ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein lig...   145   4e-33
emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]   145   4e-33
ref|XP_002528126.1| hypothetical protein RCOM_0146510 [Ricinus c...   133   2e-29
ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29

>emb|CBI16457.3| unnamed protein product [Vitis vinifera]
          Length = 1084

 Score =  145 bits (365), Expect = 4e-33
 Identities = 68/96 (70%), Positives = 75/96 (78%)
 Frame = +3

Query: 3   GIPNAQLSACAHLYLSVVYNLQKKDKLSAKHLLQVFCDSPLQARTRLLPELWDVLFLPNL 182
           G+PN +LSACAHLYL ++Y LQKKDK SAKH+LQVFCDSP QART LLPELWD LFLP L
Sbjct: 297 GVPNYKLSACAHLYLGLIYKLQKKDKASAKHILQVFCDSPFQARTMLLPELWDYLFLPQL 356

Query: 183 SHLKVWYDQEASSIQDTXXXXXXXXXXEKVYNEILD 290
           SHLKVWY+QEA S+ D           EKVYNEILD
Sbjct: 357 SHLKVWYNQEADSLADAPSRQRKLELLEKVYNEILD 392


>ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
           vinifera]
          Length = 1148

 Score =  145 bits (365), Expect = 4e-33
 Identities = 68/96 (70%), Positives = 75/96 (78%)
 Frame = +3

Query: 3   GIPNAQLSACAHLYLSVVYNLQKKDKLSAKHLLQVFCDSPLQARTRLLPELWDVLFLPNL 182
           G+PN +LSACAHLYL ++Y LQKKDK SAKH+LQVFCDSP QART LLPELWD LFLP L
Sbjct: 333 GVPNYKLSACAHLYLGLIYKLQKKDKASAKHILQVFCDSPFQARTMLLPELWDYLFLPQL 392

Query: 183 SHLKVWYDQEASSIQDTXXXXXXXXXXEKVYNEILD 290
           SHLKVWY+QEA S+ D           EKVYNEILD
Sbjct: 393 SHLKVWYNQEADSLADAPSRQRKLELLEKVYNEILD 428


>emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]
          Length = 1148

 Score =  145 bits (365), Expect = 4e-33
 Identities = 68/96 (70%), Positives = 75/96 (78%)
 Frame = +3

Query: 3   GIPNAQLSACAHLYLSVVYNLQKKDKLSAKHLLQVFCDSPLQARTRLLPELWDVLFLPNL 182
           G+PN +LSACAHLYL ++Y LQKKDK SAKH+LQVFCDSP QART LLPELWD LFLP L
Sbjct: 333 GVPNYKLSACAHLYLGLIYKLQKKDKASAKHILQVFCDSPFQARTMLLPELWDYLFLPQL 392

Query: 183 SHLKVWYDQEASSIQDTXXXXXXXXXXEKVYNEILD 290
           SHLKVWY+QEA S+ D           EKVYNEILD
Sbjct: 393 SHLKVWYNQEADSLADAPSRQRKLELLEKVYNEILD 428


>ref|XP_002528126.1| hypothetical protein RCOM_0146510 [Ricinus communis]
           gi|223532465|gb|EEF34256.1| hypothetical protein
           RCOM_0146510 [Ricinus communis]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-29
 Identities = 63/97 (64%), Positives = 74/97 (76%)
 Frame = +3

Query: 3   GIPNAQLSACAHLYLSVVYNLQKKDKLSAKHLLQVFCDSPLQARTRLLPELWDVLFLPNL 182
           GIPN +LSACAHLY SV+Y LQKKD+ S+K+LLQVFCDSP  ART LLPELWD LF P+L
Sbjct: 336 GIPNFRLSACAHLYRSVIYKLQKKDRASSKYLLQVFCDSPFSARTILLPELWDFLFFPHL 395

Query: 183 SHLKVWYDQEASSIQDTXXXXXXXXXXEKVYNEILDS 293
           SH+K WY+QEA S+ +T          +KVYNE LDS
Sbjct: 396 SHMKEWYNQEADSLLNTPSKIKKLELLDKVYNETLDS 432


>ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|222841453|gb|EEE79000.1|
           predicted protein [Populus trichocarpa]
          Length = 1159

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/97 (63%), Positives = 74/97 (76%)
 Frame = +3

Query: 3   GIPNAQLSACAHLYLSVVYNLQKKDKLSAKHLLQVFCDSPLQARTRLLPELWDVLFLPNL 182
           G PN++LSACAH+YLSV+Y L+KKDK+SAKHLLQVFCDSP  ART LL ELWD LF P+L
Sbjct: 345 GTPNSRLSACAHIYLSVIYKLRKKDKVSAKHLLQVFCDSPFLARTLLLSELWDYLFFPHL 404

Query: 183 SHLKVWYDQEASSIQDTXXXXXXXXXXEKVYNEILDS 293
           SHLK WY +EA  + +T          +KVYNE+LDS
Sbjct: 405 SHLKTWYKKEADPLFNTASKITKLKFLDKVYNEVLDS 441


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