BLASTX nr result

ID: Coptis24_contig00035789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035789
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277646.2| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA-bin...    79   5e-13
emb|CBI39602.3| unnamed protein product [Vitis vinifera]               79   5e-13
emb|CAN71813.1| hypothetical protein VITISV_023418 [Vitis vinifera]    79   5e-13
ref|XP_004165927.1| PREDICTED: LOW QUALITY PROTEIN: rab9 effecto...    75   5e-12
gb|AFW80626.1| hypothetical protein ZEAMMB73_821757 [Zea mays]         74   1e-11

>ref|XP_002277646.2| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA-binding domain-containing
           protein 4 [Vitis vinifera]
          Length = 637

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 35/47 (74%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
 Frame = +2

Query: 140 MRCLGGEVVKK-AMWLYPKVSGFNRSERWGHSACSYNGVVYIFGGCC 277
           M  LGGE  KK AMWLYPKV GFN SERWGHSAC  +G+VY+FGGCC
Sbjct: 1   MGSLGGETAKKKAMWLYPKVLGFNPSERWGHSACYSHGLVYVFGGCC 47


>emb|CBI39602.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 35/47 (74%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
 Frame = +2

Query: 140 MRCLGGEVVKK-AMWLYPKVSGFNRSERWGHSACSYNGVVYIFGGCC 277
           M  LGGE  KK AMWLYPKV GFN SERWGHSAC  +G+VY+FGGCC
Sbjct: 1   MGSLGGETAKKKAMWLYPKVLGFNPSERWGHSACYSHGLVYVFGGCC 47


>emb|CAN71813.1| hypothetical protein VITISV_023418 [Vitis vinifera]
          Length = 672

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 35/47 (74%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
 Frame = +2

Query: 140 MRCLGGEVVKK-AMWLYPKVSGFNRSERWGHSACSYNGVVYIFGGCC 277
           M  LGGE  KK AMWLYPKV GFN SERWGHSAC  +G+VY+FGGCC
Sbjct: 1   MGSLGGETAKKKAMWLYPKVLGFNPSERWGHSACYSHGLVYVFGGCC 47


>ref|XP_004165927.1| PREDICTED: LOW QUALITY PROTEIN: rab9 effector protein with kelch
           motifs-like, partial [Cucumis sativus]
          Length = 606

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 33/43 (76%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
 Frame = +2

Query: 152 GGEVVKK-AMWLYPKVSGFNRSERWGHSACSYNGVVYIFGGCC 277
           GGE  KK AMWLYPKV GF  SERWGHSAC Y G VY+FGGCC
Sbjct: 1   GGETSKKKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFGGCC 43


>gb|AFW80626.1| hypothetical protein ZEAMMB73_821757 [Zea mays]
          Length = 374

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 29/37 (78%), Positives = 32/37 (86%)
 Frame = +2

Query: 167 KKAMWLYPKVSGFNRSERWGHSACSYNGVVYIFGGCC 277
           +KAMWLYPKV GFN  ERWGHSAC + GVVY+FGGCC
Sbjct: 5   RKAMWLYPKVVGFNPPERWGHSACFFEGVVYVFGGCC 41