BLASTX nr result

ID: Coptis24_contig00035781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035781
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74599.1| hypothetical protein VITISV_021494 [Vitis vinifera]    84   9e-15
emb|CBI29284.3| unnamed protein product [Vitis vinifera]               78   7e-13
ref|XP_002512694.1| conserved hypothetical protein [Ricinus comm...    75   7e-12
ref|XP_002297892.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
dbj|BAJ98687.1| predicted protein [Hordeum vulgare subsp. vulgare]     58   9e-07

>emb|CAN74599.1| hypothetical protein VITISV_021494 [Vitis vinifera]
          Length = 212

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/90 (43%), Positives = 62/90 (68%)
 Frame = -3

Query: 370 EKQGFIPIAHSIVQTMTSKGCENLSKAKEVLDQKYKMSEKGRAVTEQTRMAISATEQTVG 191
           EKQG  P+ +S +Q + SK  E  +K  + L++  K+SEKGRA+  QTR+AI A E+  G
Sbjct: 117 EKQGIFPVVNSAIQGIASKSMEMFNKTADELEENCKLSEKGRALMHQTRLAICAAEKGAG 176

Query: 190 RVGEVIVNNEHFSASALWVSTVLNKAAKCA 101
           ++G  I+NNE+ S  ++W+S V+++A+K A
Sbjct: 177 QLGTAIMNNEYVSNGSIWLSGVVDRASKYA 206


>emb|CBI29284.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 36/82 (43%), Positives = 55/82 (67%)
 Frame = -3

Query: 370 EKQGFIPIAHSIVQTMTSKGCENLSKAKEVLDQKYKMSEKGRAVTEQTRMAISATEQTVG 191
           EKQG  P+ +S +Q + SK  E  +K  + L++  K+SEKGRA+  QTR+AI A E+  G
Sbjct: 98  EKQGIFPVVNSAIQGIASKSMEMFNKTADELEENCKLSEKGRALMHQTRLAICAAEKGAG 157

Query: 190 RVGEVIVNNEHFSASALWVSTV 125
           ++G  I+NNE+ S  ++W+S V
Sbjct: 158 QLGTAIMNNEYVSNGSIWLSGV 179


>ref|XP_002512694.1| conserved hypothetical protein [Ricinus communis]
           gi|223548655|gb|EEF50146.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 181

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 44/110 (40%), Positives = 63/110 (57%)
 Frame = -3

Query: 376 KNEKQGFIPIAHSIVQTMTSKGCENLSKAKEVLDQKYKMSEKGRAVTEQTRMAISATEQT 197
           K+E Q F+    + +QTM  KG E L K K  L + YK+SEK +  T++ R A S    T
Sbjct: 73  KHEVQEFLASVQAAMQTMALKGVEMLKKVKNELVENYKLSEKVKVPTDRRRSAASTAGGT 132

Query: 196 VGRVGEVIVNNEHFSASALWVSTVLNKAAKCAAELCSQNKENDPNSRKQK 47
             ++G  I +NE  S  AL +  VL+K +K  + L   +K ++PNSRKQK
Sbjct: 133 AEQIGGAIKSNEFISGGALRLYGVLDKVSKGLSSL-GNDKRDNPNSRKQK 181


>ref|XP_002297892.1| predicted protein [Populus trichocarpa] gi|222845150|gb|EEE82697.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 39/100 (39%), Positives = 52/100 (52%)
 Frame = -3

Query: 358 FIPIAHSIVQTMTSKGCENLSKAKEVLDQKYKMSEKGRAVTEQTRMAISATEQTVGRVGE 179
           F+P     +QT+  K  E LSKA+E L++ YK+SEKGR +  QTR A+   EQ       
Sbjct: 99  FVPAVQVAMQTVALKSVEMLSKARE-LEENYKLSEKGRTLALQTRAAVYDAEQAA----- 152

Query: 178 VIVNNEHFSASALWVSTVLNKAAKCAAELCSQNKENDPNS 59
                 + SA A W+S  L+K +K    L    K N PNS
Sbjct: 153 ----ENYVSAGAGWLSGALDKTSKRVLSL-GTVKRNGPNS 187


>dbj|BAJ98687.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 312

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
 Frame = -3

Query: 373 NEKQGFIPIAHSIVQTMTSKG--CENLSKAKEVLDQKYKMSEKGRAVTEQTRMAISATEQ 200
           +E+ GF   A + V ++  K    E  +    V+++K K  ++   V+++T+ A++A EQ
Sbjct: 191 DERHGFTSTATAKVASIDKKIGLSEKFTLGTTVVNEKVKEMDQKFQVSDKTKSALAAAEQ 250

Query: 199 TVGRVGEVIVNNEHFSASALWVSTVLNKAAKCAAELCSQNKENDPNSRKQK 47
           TV   G  I+ N +   SA WV++   K AK A ++ +  KE      +QK
Sbjct: 251 TVSNAGSAIMKNRYVFTSASWVTSAFGKVAKAATDVGTMTKEKMSAEEQQK 301


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