BLASTX nr result

ID: Coptis24_contig00035778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035778
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285224.2| PREDICTED: uncharacterized protein LOC100251...   113   3e-23
gb|AFZ78611.1| hypothetical protein [Populus tomentosa]               106   3e-21
ref|XP_002304167.1| predicted protein [Populus trichocarpa] gi|2...   106   3e-21
ref|XP_002517552.1| conserved hypothetical protein [Ricinus comm...    92   6e-17
ref|XP_003546937.1| PREDICTED: uncharacterized protein LOC100776...    87   4e-15

>ref|XP_002285224.2| PREDICTED: uncharacterized protein LOC100251511 [Vitis vinifera]
          Length = 746

 Score =  113 bits (283), Expect = 3e-23
 Identities = 98/234 (41%), Positives = 124/234 (52%), Gaps = 17/234 (7%)
 Frame = +2

Query: 2    LPEIKLMKPLQ-KELRVFLEEEQKASEAGLCSIXXXXXXXXXXXXTSILT--EMPWQYK- 169
            LP IK    L  KELRVFLEEEQKASEA L  I               +   E P + + 
Sbjct: 441  LPGIKPSSALSHKELRVFLEEEQKASEAALSLIEERKQEEIEEEPAENVNSREKPEETRL 500

Query: 170  SLNLVEDETLLEDKLQKLNIEEVNNRMKNTADSVIQSPE-NEDEASRKQRGKGNVEKWLQ 346
            S+  VEDE  +E++LQ L I E  N   NT   V++ PE  EDE  RKQRGKGNVEKWLQ
Sbjct: 501  SIVAVEDENTIEERLQALEIGEGKNY--NTQFPVLREPEIEEDEECRKQRGKGNVEKWLQ 558

Query: 347  ILLSDSKEPSPVNSPHQITHEDAKSRTDEIIGKLKFPVSEEREGFNQKCSETTKAVQARN 526
            +LL +++E    ++  Q   E   SRTDE+I +L       +  F +  ++  K    ++
Sbjct: 559  MLLENTQEEGFGSNNAQ---EHETSRTDEVIRQLNLKYPYNQTKFPESENKQQKIRGRKD 615

Query: 527  CKKRTEQ-VEMDGR---------NML-SQKSNA-SEVPSMGKGVGSCKSFEGRE 652
              K  E  VE DG          N+L S KS A   V S+GKGVGS  SFEG+E
Sbjct: 616  QWKGKEPIVEKDGNSNTVSENLPNLLPSDKSYADGVVGSIGKGVGSSMSFEGKE 669


>gb|AFZ78611.1| hypothetical protein [Populus tomentosa]
          Length = 484

 Score =  106 bits (265), Expect = 3e-21
 Identities = 87/224 (38%), Positives = 118/224 (52%), Gaps = 7/224 (3%)
 Frame = +2

Query: 2   LPEIKLMKPLQKELRVFLEEEQKASEAGLCSIXXXXXXXXXXXXTSI-LTEMPWQY-KSL 175
           LP I+   PL KELRVFLEEEQKASEAGL +                 +T M  ++ KS+
Sbjct: 195 LPGIRPRTPLHKELRVFLEEEQKASEAGLSANEESKHGEIEEELKQPEMTIMKEEHNKSI 254

Query: 176 NLVEDETLLEDKLQKLNIEEVNNRMKNTADSVIQSPE-NEDEASRKQRGKGNVEKWLQIL 352
              E+E  +E KL+ L I E   +       VIQ  E  EDE SRKQRGKGNVE+WLQ+L
Sbjct: 255 TPFENEIPIEYKLRALEIGE--GKRDKIQFPVIQDQEIEEDEESRKQRGKGNVERWLQLL 312

Query: 353 LSDS-KEPSPVNSPHQITHEDAKSRTDEIIGKL--KFPVSEEREGFNQKCSETTKAVQAR 523
           L +S +E  P NS     +    + +D+II KL  KFP  E +     +  +    +Q  
Sbjct: 313 LENSGEEIEPQNS-----NGSGANTSDDIITKLNQKFPQKEAKSSTQVQGEKPQLILQGN 367

Query: 524 NCKKRTEQ-VEMDGRNMLSQKSNASEVPSMGKGVGSCKSFEGRE 652
           +   R ++ VE++      +K N S     G+ +GS  SFEG+E
Sbjct: 368 DKGTRVQEIVEIEPNKTPKEKGNGS--VGGGEAIGSSNSFEGKE 409


>ref|XP_002304167.1| predicted protein [Populus trichocarpa] gi|222841599|gb|EEE79146.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score =  106 bits (265), Expect = 3e-21
 Identities = 87/224 (38%), Positives = 118/224 (52%), Gaps = 7/224 (3%)
 Frame = +2

Query: 2   LPEIKLMKPLQKELRVFLEEEQKASEAGLCSIXXXXXXXXXXXXTSI-LTEMPWQY-KSL 175
           LP I+   PL KELRVFLEEEQKASEAGL +                 +T M  ++ KS+
Sbjct: 195 LPGIRPRTPLHKELRVFLEEEQKASEAGLSANEESKHGEIEEELKQPEMTIMKEEHNKSI 254

Query: 176 NLVEDETLLEDKLQKLNIEEVNNRMKNTADSVIQSPE-NEDEASRKQRGKGNVEKWLQIL 352
              E+E  +E KL+ L I E   +       VIQ  E  EDE SRKQRGKGNVE+WLQ+L
Sbjct: 255 TPFENEIPIEYKLRALEIGE--GKRDKIQFPVIQDQEIEEDEESRKQRGKGNVERWLQLL 312

Query: 353 LSDS-KEPSPVNSPHQITHEDAKSRTDEIIGKL--KFPVSEEREGFNQKCSETTKAVQAR 523
           L +S +E  P NS     +    + +D+II KL  KFP  E +     +  +    +Q  
Sbjct: 313 LENSGEEIEPQNS-----NGSGANTSDDIITKLNQKFPQKEAKSSTQVQGEKPQLILQGN 367

Query: 524 NCKKRTEQ-VEMDGRNMLSQKSNASEVPSMGKGVGSCKSFEGRE 652
           +   R ++ VE++      +K N S     G+ +GS  SFEG+E
Sbjct: 368 DKGTRVQEIVEIEPNKTPKEKGNGS--VGGGEAIGSSNSFEGKE 409


>ref|XP_002517552.1| conserved hypothetical protein [Ricinus communis]
           gi|223543184|gb|EEF44716.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 449

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 86/233 (36%), Positives = 118/233 (50%), Gaps = 24/233 (10%)
 Frame = +2

Query: 26  PLQKELRVFLEEEQKASEAGLCSIXXXXXXXXXXXXTS-----ILTEMPWQYKSLNL-VE 187
           PL KELRVFLEEEQKASE    S                    I+ E P ++  L + +E
Sbjct: 154 PLHKELRVFLEEEQKASEEAALSASEVGKHEAIEEELEKHAKRIIREDPDKHNKLIIALE 213

Query: 188 DETLLEDKLQKLNIEEVNNRMKNTADSVIQSPEN--EDEASRKQRGKGNVEKWLQILLSD 361
           +E  +E KLQ L   E+ +R ++     +   +   EDE SRKQRGKGNVE+WLQ+LL +
Sbjct: 214 NEISIEHKLQAL---EIGDRKRDKFQFPLNREQEIEEDEESRKQRGKGNVERWLQMLLEN 270

Query: 362 SK-EPSPVNSPHQITHEDAKSRTDEIIGKL--KFPVSEERE----GF-NQKC------SE 499
           S+ E  P NS     +   K R D+II KL  KFP  E R     GF N K         
Sbjct: 271 SQVEIEPDNS-----NSLEKCRNDDIITKLNQKFPQQETRSSKYPGFDNSKALMHVPRKN 325

Query: 500 TTKAVQARNCKKRTEQVE--MDGRNMLSQKSNASEVPSMGKGVGSCKSFEGRE 652
               +Q ++  K+ E+++  ++    L  K N+SE     +G+ S K FEG+E
Sbjct: 326 QPTIIQEKDKGKKIEEIDELVEANKTLICKENSSEAGV--EGIES-KDFEGKE 375


>ref|XP_003546937.1| PREDICTED: uncharacterized protein LOC100776970 [Glycine max]
          Length = 718

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 71/214 (33%), Positives = 111/214 (51%), Gaps = 8/214 (3%)
 Frame = +2

Query: 2    LPEIKLMKPLQKELRVFLEEEQKASEAGLCSIXXXXXXXXXXXXTSILTEMPWQYKSLNL 181
            LP  +   PL+KELRVFLEEEQ++SE  L +                  E   + KS   
Sbjct: 429  LPGPRPRTPLRKELRVFLEEEQRSSEVDLSA----NEEQKREEKVEQKREEKVEQKSSVA 484

Query: 182  VEDETLLEDKLQKLNIEEVNNRMKNTADSVIQSPENEDEASRKQRGKGNVEKWLQILLSD 361
            +++E  +E +LQKL I E       +   + ++   EDE +RKQRGKGNVEKWLQ+LL +
Sbjct: 485  LDEENSIEQRLQKLKISEGKRSYGISFSGLHKTEIEEDEETRKQRGKGNVEKWLQMLLEN 544

Query: 362  SKEPSPVNSPHQITHEDAKSRTDE-IIGKL--KFPVSE---EREGFNQKCSETTKAVQAR 523
             ++     +  Q T E+A   T+E II +L  KFP  E    +   +    +  + +Q R
Sbjct: 545  GQQQE--GTDPQETSENASCGTEEKIIQQLNQKFPQKELKISKVSDSDYKEKQLQLLQDR 602

Query: 524  N-CKKRTEQVEMDGRNML-SQKSNASEVPSMGKG 619
            N   ++ +++E + RN++ +   N S    +G+G
Sbjct: 603  NGWTEKEDRIENEARNIIPTGYKNYSGEACIGEG 636


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