BLASTX nr result

ID: Coptis24_contig00035755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035755
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_06580270.1| LOW QUALITY PROTEIN: conserved hypothetical p...    86   4e-30
ref|ZP_16642013.1| hypothetical protein HMPREF9619_02347 [Propio...   121   5e-26
ref|ZP_16583325.1| conserved domain protein [Propionibacterium a...   121   5e-26
ref|ZP_16586211.1| hypothetical protein HMPREF9589_00552 [Propio...   121   5e-26
ref|ZP_16539703.1| hypothetical protein HMPREF9582_02157 [Propio...   121   5e-26

>ref|ZP_06580270.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Streptomyces
           ghanaensis ATCC 14672] gi|291343775|gb|EFE70731.1| LOW
           QUALITY PROTEIN: conserved hypothetical protein
           [Streptomyces ghanaensis ATCC 14672]
          Length = 134

 Score = 85.9 bits (211), Expect(2) = 4e-30
 Identities = 42/53 (79%), Positives = 44/53 (83%)
 Frame = -3

Query: 299 CPGLHACYNGWYREWRACEGERISESRSQFGLGSATRPHEVGIASNRRSATLR 141
           C GLH CYNG Y E R  E ERIS+SRSQFGLGSATRPHEVG+ASNRRSA LR
Sbjct: 36  CLGLHTCYNGRYNELRYREVERISKSRSQFGLGSATRPHEVGVASNRRSALLR 88



 Score = 70.5 bits (171), Expect(2) = 4e-30
 Identities = 37/46 (80%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
 Frame = -2

Query: 141 VNTFPGLVHTARQVMKVGNTRSRWPNRCG-GAVEGGTGD*D*VETR 7
           VNTFPG VHTAR V KVGNTRSRWPN  G GAVEGGTGD D V TR
Sbjct: 89  VNTFPGPVHTARHVTKVGNTRSRWPNPPGEGAVEGGTGDWDEVVTR 134


>ref|ZP_16642013.1| hypothetical protein HMPREF9619_02347 [Propionibacterium acnes
           HL082PA2] gi|314965109|gb|EFT09208.1| hypothetical
           protein HMPREF9619_02347 [Propionibacterium acnes
           HL082PA2]
          Length = 69

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/61 (95%), Positives = 59/61 (96%)
 Frame = +1

Query: 1   RLPCFDLVLITSPTFDGSPTTVRPPASGVTNFHDLTGGVYKARERIHRSVADLRLLAIPT 180
           RLPC+DLVLITSPTFDGSPTTVRPPASGVTNFHDLTGGVYK RERIHRSVADLRLLA PT
Sbjct: 9   RLPCYDLVLITSPTFDGSPTTVRPPASGVTNFHDLTGGVYKPRERIHRSVADLRLLATPT 68

Query: 181 S 183
           S
Sbjct: 69  S 69


>ref|ZP_16583325.1| conserved domain protein [Propionibacterium acnes HL046PA2]
           gi|313819502|gb|EFS57216.1| conserved domain protein
           [Propionibacterium acnes HL046PA2]
          Length = 314

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/61 (95%), Positives = 59/61 (96%)
 Frame = +1

Query: 1   RLPCFDLVLITSPTFDGSPTTVRPPASGVTNFHDLTGGVYKARERIHRSVADLRLLAIPT 180
           RLPC+DLVLITSPTFDGSPTTVRPPASGVTNFHDLTGGVYK RERIHRSVADLRLLA PT
Sbjct: 254 RLPCYDLVLITSPTFDGSPTTVRPPASGVTNFHDLTGGVYKPRERIHRSVADLRLLATPT 313

Query: 181 S 183
           S
Sbjct: 314 S 314


>ref|ZP_16586211.1| hypothetical protein HMPREF9589_00552 [Propionibacterium acnes
           HL059PA1] gi|313816616|gb|EFS54330.1| hypothetical
           protein HMPREF9589_00552 [Propionibacterium acnes
           HL059PA1]
          Length = 349

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/61 (95%), Positives = 59/61 (96%)
 Frame = +1

Query: 1   RLPCFDLVLITSPTFDGSPTTVRPPASGVTNFHDLTGGVYKARERIHRSVADLRLLAIPT 180
           RLPC+DLVLITSPTFDGSPTTVRPPASGVTNFHDLTGGVYK RERIHRSVADLRLLA PT
Sbjct: 289 RLPCYDLVLITSPTFDGSPTTVRPPASGVTNFHDLTGGVYKPRERIHRSVADLRLLATPT 348

Query: 181 S 183
           S
Sbjct: 349 S 349


>ref|ZP_16539703.1| hypothetical protein HMPREF9582_02157 [Propionibacterium acnes
           HL060PA1] gi|422465777|ref|ZP_16542364.1| hypothetical
           protein HMPREF9578_02279 [Propionibacterium acnes
           HL110PA4] gi|422516913|ref|ZP_16593020.1| hypothetical
           protein HMPREF9576_02368 [Propionibacterium acnes
           HL110PA2] gi|313801208|gb|EFS42468.1| hypothetical
           protein HMPREF9576_02368 [Propionibacterium acnes
           HL110PA2] gi|315092217|gb|EFT64193.1| hypothetical
           protein HMPREF9578_02279 [Propionibacterium acnes
           HL110PA4] gi|315094878|gb|EFT66854.1| hypothetical
           protein HMPREF9582_02157 [Propionibacterium acnes
           HL060PA1]
          Length = 92

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/61 (95%), Positives = 59/61 (96%)
 Frame = +1

Query: 1   RLPCFDLVLITSPTFDGSPTTVRPPASGVTNFHDLTGGVYKARERIHRSVADLRLLAIPT 180
           RLPC+DLVLITSPTFDGSPTTVRPPASGVTNFHDLTGGVYK RERIHRSVADLRLLA PT
Sbjct: 32  RLPCYDLVLITSPTFDGSPTTVRPPASGVTNFHDLTGGVYKPRERIHRSVADLRLLATPT 91

Query: 181 S 183
           S
Sbjct: 92  S 92


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