BLASTX nr result

ID: Coptis24_contig00035754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035754
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]   160   1e-37
emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]   159   2e-37
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]   159   2e-37
emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]   158   4e-37
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          156   2e-36

>emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]
          Length = 1234

 Score =  160 bits (405), Expect = 1e-37
 Identities = 87/175 (49%), Positives = 111/175 (63%)
 Frame = -2

Query: 527 CGKKGHYARDCRYXXXXXXXXXXXXXXXNMVEEKATELVAMVSEMHVGMITELNMAAATK 348
           CGK GHYAR+CR+                +V     E++A +S++ V            K
Sbjct: 262 CGKPGHYARECRFRKDQKGA---------VVNAIDEEIIATLSDVCV---------VQGK 303

Query: 347 SFDWWLDSGATIHVCNDKA*YKTYEAATDGQEVLMGNHNSAKVLGKGSVELQFTSGKKLT 168
              WW D+ AT+HV  DK+ +KT+E A   QEV MGN   +KVLGKG++E+ FTSGKK+T
Sbjct: 304 VQGWWYDTCATVHVTYDKSLFKTFEDAKGBQEVQMGNEGKSKVLGKGTIEVVFTSGKKVT 363

Query: 167 LMNVLHVPEVRKNLVSANLLCKNGFKVVLESDKIILSKNGVFVGKGYSCDGMFKL 3
           L NVL+VP++ KNLVS +LL K G K V ES K+ILSK+G FVGKGYSCDGM KL
Sbjct: 364 LTNVLYVPDMNKNLVSGDLLGKPGIKAVFESGKLILSKSGNFVGKGYSCDGMIKL 418


>emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]
          Length = 1105

 Score =  159 bits (403), Expect = 2e-37
 Identities = 86/175 (49%), Positives = 112/175 (64%)
 Frame = -2

Query: 527 CGKKGHYARDCRYXXXXXXXXXXXXXXXNMVEEKATELVAMVSEMHVGMITELNMAAATK 348
           CGK GHYAR+CRY                +V     E++A +S++ V            K
Sbjct: 55  CGKPGHYARECRYRKDQKRV---------VVNAIDEEIIATLSDVCV---------VQGK 96

Query: 347 SFDWWLDSGATIHVCNDKA*YKTYEAATDGQEVLMGNHNSAKVLGKGSVELQFTSGKKLT 168
              WW D+ AT++V  DK+ +KT+E A   QEV MGN   +KVLGKG++E+ FTSGK++T
Sbjct: 97  VQGWWYDTCATVYVTYDKSLFKTFEDAKGDQEVQMGNEGGSKVLGKGTIEVAFTSGKRVT 156

Query: 167 LMNVLHVPEVRKNLVSANLLCKNGFKVVLESDKIILSKNGVFVGKGYSCDGMFKL 3
           L+NVL+VP++ KNLVS +LL K G K V ES K+ILSK+G FVGKGYSCDGM KL
Sbjct: 157 LINVLYVPDMNKNLVSGDLLGKPGIKAVFESGKLILSKSGNFVGKGYSCDGMIKL 211


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score =  159 bits (402), Expect = 2e-37
 Identities = 86/175 (49%), Positives = 111/175 (63%)
 Frame = -2

Query: 527 CGKKGHYARDCRYXXXXXXXXXXXXXXXNMVEEKATELVAMVSEMHVGMITELNMAAATK 348
           CGK GHYAR+CR+                +V     E++A +S++ V            K
Sbjct: 262 CGKPGHYARECRFRKDQKGA---------VVNAIDEEIIATLSDVCV---------VQGK 303

Query: 347 SFDWWLDSGATIHVCNDKA*YKTYEAATDGQEVLMGNHNSAKVLGKGSVELQFTSGKKLT 168
              WW D+ AT+HV  DK+ +KT+E A   QEV MGN   +KVLGKG++E+ FTSGKK+T
Sbjct: 304 VQGWWYDTCATVHVTYDKSLFKTFEDAKGDQEVQMGNEGKSKVLGKGTIEVVFTSGKKVT 363

Query: 167 LMNVLHVPEVRKNLVSANLLCKNGFKVVLESDKIILSKNGVFVGKGYSCDGMFKL 3
           L NVL+VP++ KNLVS +LL K G K V ES K+IL+K+G FVGKGYSCDGM KL
Sbjct: 364 LKNVLYVPDMNKNLVSGDLLGKPGIKAVFESGKLILTKSGNFVGKGYSCDGMIKL 418


>emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]
          Length = 804

 Score =  158 bits (400), Expect = 4e-37
 Identities = 86/175 (49%), Positives = 110/175 (62%)
 Frame = -2

Query: 527 CGKKGHYARDCRYXXXXXXXXXXXXXXXNMVEEKATELVAMVSEMHVGMITELNMAAATK 348
           CGK GHYAR+CR+                +V     E++A +S++ V            K
Sbjct: 262 CGKPGHYARECRFRKDQKGV---------VVNAIDEEIIATLSDVCV---------VQGK 303

Query: 347 SFDWWLDSGATIHVCNDKA*YKTYEAATDGQEVLMGNHNSAKVLGKGSVELQFTSGKKLT 168
              WW D+ AT+HV  DK+ +KT+E A   QEV MGN   +KVLGKG++E+ FTSGKK+T
Sbjct: 304 VQGWWYDTCATVHVTYDKSLFKTFEDAKGDQEVQMGNEGKSKVLGKGTIEVVFTSGKKVT 363

Query: 167 LMNVLHVPEVRKNLVSANLLCKNGFKVVLESDKIILSKNGVFVGKGYSCDGMFKL 3
           L NVL+VP++ KNLVS +LL K G K V ES K+IL K+G FVGKGYSCDGM KL
Sbjct: 364 LKNVLYVPDMNKNLVSGDLLGKPGIKAVFESGKLILXKSGNFVGKGYSCDGMIKL 418


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  156 bits (395), Expect = 2e-36
 Identities = 81/177 (45%), Positives = 119/177 (67%)
 Frame = -2

Query: 533 YHCGKKGHYARDCRYXXXXXXXXXXXXXXXNMVEEKATELVAMVSEMHVGMITELNMAAA 354
           Y+C K GH A DCR                  V E  T+ V+ ++   V  + E+NM  +
Sbjct: 272 YNCDKMGHKASDCRLPKKKREAN---------VVENITQHVSDINLSAV--VLEVNMVGS 320

Query: 353 TKSFDWWLDSGATIHVCNDKA*YKTYEAATDGQEVLMGNHNSAKVLGKGSVELQFTSGKK 174
               +WW+D+GAT HVC+DK  + ++EAA++ +++ MGN  ++++ G+G V L+ TSGK+
Sbjct: 321 NPR-EWWIDTGATRHVCSDKGLFTSFEAASNREKLFMGNSATSEIEGQGKVALKMTSGKE 379

Query: 173 LTLMNVLHVPEVRKNLVSANLLCKNGFKVVLESDKIILSKNGVFVGKGYSCDGMFKL 3
           LTL NVL+VPE+RKNLVS +LL K+GF++V ESD ++LSKNG++VGKGY  DG+FKL
Sbjct: 380 LTLNNVLYVPEIRKNLVSGSLLNKHGFRMVFESDMVVLSKNGMYVGKGYVNDGLFKL 436


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