BLASTX nr result

ID: Coptis24_contig00035752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035752
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139385.1| PREDICTED: ankyrin repeat-containing protein...    74   2e-11
ref|XP_002317571.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002333254.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002317569.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002317570.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10

>ref|XP_004139385.1| PREDICTED: ankyrin repeat-containing protein At5g02620-like
           [Cucumis sativus] gi|449519004|ref|XP_004166525.1|
           PREDICTED: ankyrin repeat-containing protein
           At5g02620-like [Cucumis sativus]
          Length = 649

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
 Frame = -1

Query: 384 AKTMDFELYRCIQTGDIAKLKEIV-SEDLLLRETTCRGNTAIHVAVQYRRKDFVEVIYNK 208
           +++M+ ELY+C+ +GD  K   ++ S   LL +TT + NT +HVA  + +K   E I ++
Sbjct: 14  SESMNSELYQCVSSGDYNKFISLINSNPSLLLQTTIQSNTLLHVAAAFNQKSIAEEIIHR 73

Query: 207 CPSLLLHQNMKGETALHTAVTAASVAIVEFLINCDGAPDVVDEQQKDYETGEVDKYPKHL 28
            P +L   N K +TALH A    S  + E LI C        E+ +  +  E D Y    
Sbjct: 74  HPPILYAMNSKKDTALHLAARLGSFQVAEHLIEC-------AEKCRFGDDLEADDYRDKE 126

Query: 27  LLGMVNKE 4
           LL MVN E
Sbjct: 127 LLRMVNLE 134


>ref|XP_002317571.1| predicted protein [Populus trichocarpa] gi|222860636|gb|EEE98183.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
 Frame = -1

Query: 375 MDFELYRCIQTGDIAKLKEIVSED-LLLRETTCRGNTAIHVAVQYRRKDFVEVIYNKCPS 199
           MD  LYR  ++G++  L ++++E+  LL + T +GNT +H+AVQ+  K  V  IYN+C S
Sbjct: 1   MDSRLYRVAKSGNVYILLQLLNENPRLLTKLTPQGNTPLHIAVQFGHKGVVVEIYNRCRS 60

Query: 198 LLLHQNMKGETALHTAVTAASVAIVEFLINCDGAPDVVDEQQKDYETGEVDKYPKHLLLG 19
           LL   N  G++ LH A      +IV+FL+      +++  ++   E G+  K+    +L 
Sbjct: 61  LLTRPNSSGDSPLHVAARCGHFSIVDFLVK-----EILSAKRISTENGKTGKFD---ILR 112

Query: 18  MVNKE 4
             NKE
Sbjct: 113 QGNKE 117


>ref|XP_002333254.1| predicted protein [Populus trichocarpa] gi|222835818|gb|EEE74253.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/113 (34%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
 Frame = -1

Query: 375 MDFELYRCIQTGDIAKLKEIVSED-LLLRETTCRGNTAIHVAVQYRRKDFVEVIYNKCPS 199
           MD  LYR  ++G++  L ++++E+  LL + T +GNT +H+AVQ+  K  V  IYN+C S
Sbjct: 1   MDSRLYRVAKSGNVYILLQLLNENPRLLTKLTPQGNTPLHIAVQFGHKGVVVEIYNRCGS 60

Query: 198 LLLHQNMKGETALHTAVTAASVAIVEFLINCDGAPDVVDEQQKDYETGEVDKY 40
           LL   N  G++ LH A      +IV+FL+      +++  ++   E G+  K+
Sbjct: 61  LLTRPNSSGDSPLHVAARCGHFSIVDFLVK-----EILAAKRISTENGKTGKF 108


>ref|XP_002317569.1| predicted protein [Populus trichocarpa] gi|222860634|gb|EEE98181.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
 Frame = -1

Query: 375 MDFELYRCIQTGDIAKLKEIVSED-LLLRETTCRGNTAIHVAVQYRRKDFVEVIYNKCPS 199
           MD  LYR +++G++  L ++++E   LL + T +GNT +H+AVQ+  K  V  IYN+C S
Sbjct: 1   MDSRLYRVVKSGNVYILLQLLNEKPRLLTKLTPQGNTPLHIAVQFGHKGVVVEIYNRCRS 60

Query: 198 LLLHQNMKGETALHTAVTAASVAIVEFLI 112
           LL   N  G++ LH A      +IV+FL+
Sbjct: 61  LLTRPNSSGDSPLHVAARCGHFSIVDFLV 89


>ref|XP_002317570.1| predicted protein [Populus trichocarpa] gi|222860635|gb|EEE98182.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
 Frame = -1

Query: 375 MDFELYRCIQTGDIAKLKEIVSED-LLLRETTCRGNTAIHVAVQYRRKDFVEVIYNKCPS 199
           MD  LYR  ++G++  L ++++E+  LL + T +GNT +H+AVQ+  K  V  IYN+C S
Sbjct: 1   MDSRLYRVAKSGNVYILLQLLNENPRLLTKLTPQGNTPLHIAVQFGHKGVVVEIYNRCRS 60

Query: 198 LLLHQNMKGETALHTAVTAASVAIVEFLI 112
           LL   N  G++ LH A      +IV+FL+
Sbjct: 61  LLTRPNSSGDSPLHVAARCGHFSIVDFLV 89


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