BLASTX nr result

ID: Coptis24_contig00035748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035748
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002872323.1| hypothetical protein ARALYDRAFT_910959 [Arab...    65   4e-09
ref|NP_085486.1| hypothetical protein ArthMp014 [Arabidopsis tha...    65   4e-09

>ref|XP_002872323.1| hypothetical protein ARALYDRAFT_910959 [Arabidopsis lyrata subsp.
           lyrata] gi|297813563|ref|XP_002874665.1| hypothetical
           protein ARALYDRAFT_911416 [Arabidopsis lyrata subsp.
           lyrata] gi|297318160|gb|EFH48582.1| hypothetical protein
           ARALYDRAFT_910959 [Arabidopsis lyrata subsp. lyrata]
           gi|297320502|gb|EFH50924.1| hypothetical protein
           ARALYDRAFT_911416 [Arabidopsis lyrata subsp. lyrata]
          Length = 118

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/38 (86%), Positives = 33/38 (86%)
 Frame = +2

Query: 122 ISPYYSYFKVPLELLFPTTDRRSYFLKSYVFCSANSVP 235
           I  YYS  KVPLELLFPTTDRR YFLKSYVFCSANSVP
Sbjct: 25  IRTYYS--KVPLELLFPTTDRRFYFLKSYVFCSANSVP 60


>ref|NP_085486.1| hypothetical protein ArthMp014 [Arabidopsis thaliana]
           gi|44888111|sp|P93284.1|M150_ARATH RecName:
           Full=Uncharacterized mitochondrial protein AtMg00150;
           AltName: Full=ORF116 gi|1785686|emb|CAA69760.1| unnamed
           protein product [Arabidopsis thaliana]
          Length = 116

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/38 (86%), Positives = 33/38 (86%)
 Frame = +2

Query: 122 ISPYYSYFKVPLELLFPTTDRRSYFLKSYVFCSANSVP 235
           I  YYS  KVPLELLFPTTDRR YFLKSYVFCSANSVP
Sbjct: 25  IRTYYS--KVPLELLFPTTDRRFYFLKSYVFCSANSVP 60


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