BLASTX nr result

ID: Coptis24_contig00035740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035740
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34149.3| unnamed protein product [Vitis vinifera]              111   5e-23
ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera]    111   5e-23
ref|XP_004170546.1| PREDICTED: ATPase WRNIP1-like, partial [Cucu...   110   9e-23
ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus]   110   9e-23
ref|XP_003545063.1| PREDICTED: ATPase WRNIP1-like [Glycine max]       108   6e-22

>emb|CBI34149.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score =  111 bits (278), Expect = 5e-23
 Identities = 62/80 (77%), Positives = 70/80 (87%), Gaps = 8/80 (10%)
 Frame = +2

Query: 2   GTGKTSIAKAIVSSST----YKFVSLSAVTAGVKDVRDVVEEAKK----KINNNRQTVLF 157
           GTGKTSIAKAIV+SS+    Y+FVSLSAVTAGVKDVRDVVEEA+K    K  N+++T+LF
Sbjct: 41  GTGKTSIAKAIVNSSSQPSSYRFVSLSAVTAGVKDVRDVVEEARKIKVSKNMNSKRTLLF 100

Query: 158 VDEVHRFNKSQQDSFLPVIE 217
           VDEVHRFNKSQQDSFLPVIE
Sbjct: 101 VDEVHRFNKSQQDSFLPVIE 120


>ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera]
          Length = 534

 Score =  111 bits (278), Expect = 5e-23
 Identities = 62/80 (77%), Positives = 70/80 (87%), Gaps = 8/80 (10%)
 Frame = +2

Query: 2   GTGKTSIAKAIVSSST----YKFVSLSAVTAGVKDVRDVVEEAKK----KINNNRQTVLF 157
           GTGKTSIAKAIV+SS+    Y+FVSLSAVTAGVKDVRDVVEEA+K    K  N+++T+LF
Sbjct: 153 GTGKTSIAKAIVNSSSQPSSYRFVSLSAVTAGVKDVRDVVEEARKIKVSKNMNSKRTLLF 212

Query: 158 VDEVHRFNKSQQDSFLPVIE 217
           VDEVHRFNKSQQDSFLPVIE
Sbjct: 213 VDEVHRFNKSQQDSFLPVIE 232


>ref|XP_004170546.1| PREDICTED: ATPase WRNIP1-like, partial [Cucumis sativus]
          Length = 446

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/78 (75%), Positives = 69/78 (88%), Gaps = 6/78 (7%)
 Frame = +2

Query: 2   GTGKTSIAKAIVSSST-----YKFVSLSAVTAGVKDVRDVVEEAKK-KINNNRQTVLFVD 163
           GTGKTSIAKAIV S++     ++FVSLSAVT+GVKDVRD VEEA+K +I NN++TVLF+D
Sbjct: 44  GTGKTSIAKAIVGSTSSFSQSFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLD 103

Query: 164 EVHRFNKSQQDSFLPVIE 217
           EVHRFNKSQQDSFLPVIE
Sbjct: 104 EVHRFNKSQQDSFLPVIE 121


>ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus]
          Length = 513

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/78 (75%), Positives = 69/78 (88%), Gaps = 6/78 (7%)
 Frame = +2

Query: 2   GTGKTSIAKAIVSSST-----YKFVSLSAVTAGVKDVRDVVEEAKK-KINNNRQTVLFVD 163
           GTGKTSIAKAIV S++     ++FVSLSAVT+GVKDVRD VEEA+K +I NN++TVLF+D
Sbjct: 118 GTGKTSIAKAIVGSTSSFSQSFRFVSLSAVTSGVKDVRDAVEEARKIRIKNNKRTVLFLD 177

Query: 164 EVHRFNKSQQDSFLPVIE 217
           EVHRFNKSQQDSFLPVIE
Sbjct: 178 EVHRFNKSQQDSFLPVIE 195


>ref|XP_003545063.1| PREDICTED: ATPase WRNIP1-like [Glycine max]
          Length = 533

 Score =  108 bits (269), Expect = 6e-22
 Identities = 57/77 (74%), Positives = 69/77 (89%), Gaps = 5/77 (6%)
 Frame = +2

Query: 2   GTGKTSIAKAIVSSS----TYKFVSLSAVTAGVKDVRDVVEEAKK-KINNNRQTVLFVDE 166
           GTGKT+IAKAIV+S+    +Y+FVSLSAVT+GVKDVRD V+EA+K ++ +N+ TVLFVDE
Sbjct: 146 GTGKTTIAKAIVNSTPSTNSYRFVSLSAVTSGVKDVRDAVDEARKLRLKSNQTTVLFVDE 205

Query: 167 VHRFNKSQQDSFLPVIE 217
           VHRFNKSQQDSFLPVIE
Sbjct: 206 VHRFNKSQQDSFLPVIE 222


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