BLASTX nr result

ID: Coptis24_contig00035735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035735
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29251.3| unnamed protein product [Vitis vinifera]              153   1e-35
ref|XP_004167355.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   145   3e-33
ref|XP_004152319.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   145   3e-33
dbj|BAJ95135.1| predicted protein [Hordeum vulgare subsp. vulgare]    145   3e-33
ref|XP_002444676.1| hypothetical protein SORBIDRAFT_07g025880 [S...   144   6e-33

>emb|CBI29251.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  153 bits (387), Expect = 1e-35
 Identities = 82/138 (59%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
 Frame = -1

Query: 408 AESAMDQMDWIEKITGVIASLLNFQSPELRPPVSPVGXXXXXXXXXXXXXXXXXXXXXXA 229
           AESA+DQMDWIEKITGVIASLL+ Q+PE   P+SP+G                       
Sbjct: 410 AESALDQMDWIEKITGVIASLLSSQAPERCLPISPMGSSHHRSASESSSYESTDFDHTA- 468

Query: 228 IEDYITERNHHTT--ECSSEGSQQRRCSVKIEKPIDVLRRVPGNNKCADCGASDPDWASL 55
           +E+Y +ER+  T   E  S+G QQ R  +K EKPIDVLRRV GN+KCADCGA +PDWASL
Sbjct: 469 VEEYTSERSSATAHHERPSKGLQQIRSCIKSEKPIDVLRRVCGNDKCADCGAPEPDWASL 528

Query: 54  NLGVLICIECSGVHRNLG 1
           NLGVL+CIECSGVHRNLG
Sbjct: 529 NLGVLVCIECSGVHRNLG 546


>ref|XP_004167355.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
           AGD3-like, partial [Cucumis sativus]
          Length = 1194

 Score =  145 bits (366), Expect = 3e-33
 Identities = 78/138 (56%), Positives = 94/138 (68%), Gaps = 2/138 (1%)
 Frame = -1

Query: 408 AESAMDQMDWIEKITGVIASLLNFQSPELRPPVSPVGXXXXXXXXXXXXXXXXXXXXXXA 229
           AESA+DQMDWIEKITGVIASLL+ Q+PE     SP+G                       
Sbjct: 395 AESALDQMDWIEKITGVIASLLSSQAPERCLAGSPMGSGHHRSTSESSSFESSDFDQTA- 453

Query: 228 IEDYITERNHHTTECS--SEGSQQRRCSVKIEKPIDVLRRVPGNNKCADCGASDPDWASL 55
           +E+Y +ER+  ++     S   QQ+R  +KIEKPID+LRRV GN+KCADCGA +PDWASL
Sbjct: 454 VEEYTSERSLSSSHMDRPSRNLQQQRSVMKIEKPIDILRRVCGNDKCADCGAPEPDWASL 513

Query: 54  NLGVLICIECSGVHRNLG 1
           NLGVL+CIECSGVHRNLG
Sbjct: 514 NLGVLVCIECSGVHRNLG 531


>ref|XP_004152319.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
           AGD3-like [Cucumis sativus]
          Length = 1191

 Score =  145 bits (366), Expect = 3e-33
 Identities = 78/138 (56%), Positives = 94/138 (68%), Gaps = 2/138 (1%)
 Frame = -1

Query: 408 AESAMDQMDWIEKITGVIASLLNFQSPELRPPVSPVGXXXXXXXXXXXXXXXXXXXXXXA 229
           AESA+DQMDWIEKITGVIASLL+ Q+PE     SP+G                       
Sbjct: 392 AESALDQMDWIEKITGVIASLLSSQAPERCLAGSPMGSGHHRSTSESSSFESSDFDQTA- 450

Query: 228 IEDYITERNHHTTECS--SEGSQQRRCSVKIEKPIDVLRRVPGNNKCADCGASDPDWASL 55
           +E+Y +ER+  ++     S   QQ+R  +KIEKPID+LRRV GN+KCADCGA +PDWASL
Sbjct: 451 VEEYTSERSLSSSHMDRPSRNLQQQRSVMKIEKPIDILRRVCGNDKCADCGAPEPDWASL 510

Query: 54  NLGVLICIECSGVHRNLG 1
           NLGVL+CIECSGVHRNLG
Sbjct: 511 NLGVLVCIECSGVHRNLG 528


>dbj|BAJ95135.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 835

 Score =  145 bits (366), Expect = 3e-33
 Identities = 77/138 (55%), Positives = 94/138 (68%), Gaps = 2/138 (1%)
 Frame = -1

Query: 408 AESAMDQMDWIEKITGVIASLLNFQSPELRPPVSPVGXXXXXXXXXXXXXXXXXXXXXXA 229
           AESAMDQMDWIEKITGVIASLL+ QSPE R  +SP G                       
Sbjct: 409 AESAMDQMDWIEKITGVIASLLSSQSPERRLLLSPKGSGHHRTNSESSSFSSSTELDHSM 468

Query: 228 IEDYITERNHHTT--ECSSEGSQQRRCSVKIEKPIDVLRRVPGNNKCADCGASDPDWASL 55
            ED++ E+N  +   E SS  +Q  R S++ +KPI++LR+V GN+ CADCGA++PDWASL
Sbjct: 469 SEDFMMEKNSGSGYFEHSSRVTQHHRTSMRPDKPIELLRKVVGNDVCADCGAAEPDWASL 528

Query: 54  NLGVLICIECSGVHRNLG 1
           NLGVL+CIECSGVHRNLG
Sbjct: 529 NLGVLVCIECSGVHRNLG 546


>ref|XP_002444676.1| hypothetical protein SORBIDRAFT_07g025880 [Sorghum bicolor]
           gi|241941026|gb|EES14171.1| hypothetical protein
           SORBIDRAFT_07g025880 [Sorghum bicolor]
          Length = 824

 Score =  144 bits (364), Expect = 6e-33
 Identities = 76/136 (55%), Positives = 87/136 (63%)
 Frame = -1

Query: 408 AESAMDQMDWIEKITGVIASLLNFQSPELRPPVSPVGXXXXXXXXXXXXXXXXXXXXXXA 229
           AESA+DQMDWIEKITGVIASLL+ QSPE     SP G                       
Sbjct: 409 AESAVDQMDWIEKITGVIASLLSSQSPEQCFLSSPKGSGHDRSTSDGSSFTSSVEFEPST 468

Query: 228 IEDYITERNHHTTECSSEGSQQRRCSVKIEKPIDVLRRVPGNNKCADCGASDPDWASLNL 49
           I+D + E+     +    G+   R SVK EKPID+LR+V GNN CADCGAS+PDWASLNL
Sbjct: 469 IDDLVLEKYSGNGQHDVRGTHHHRTSVKPEKPIDLLRKVDGNNMCADCGASEPDWASLNL 528

Query: 48  GVLICIECSGVHRNLG 1
           G L+CIECSGVHRNLG
Sbjct: 529 GALLCIECSGVHRNLG 544