BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035725
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat...   137   9e-31
emb|CBI30291.3| unnamed protein product [Vitis vinifera]              137   9e-31
emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]   137   9e-31
ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26

>ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/81 (80%), Positives = 75/81 (92%)
 Frame = +3

Query: 6   TSLIDGYVEKDQIDKALSVFLELKRQGIEPNEFTFSTLIKACANQAALEQGAQLHAQVIK 185
           T LIDGYVE +QI+K LSVF+EL+RQGIEPNEFTFS+LIKACANQAALEQG QLHAQV+K
Sbjct: 278 TCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMK 337

Query: 186 SHLEKDPFVSSVLVDMYGKCG 248
            + ++DPFVSS+LVDMYGKCG
Sbjct: 338 INFDEDPFVSSILVDMYGKCG 358



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/81 (35%), Positives = 47/81 (58%)
 Frame = +3

Query: 6   TSLIDGYVEKDQIDKALSVFLELKRQGIEPNEFTFSTLIKACANQAALEQGAQLHAQVIK 185
           T++I G  +  +  +A+  F  ++  G  P +F FS+ I+ACA+  ++E G Q+H   +K
Sbjct: 75  TAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALK 134

Query: 186 SHLEKDPFVSSVLVDMYGKCG 248
             +  + FV S L DMY KCG
Sbjct: 135 FGIGSELFVGSNLEDMYSKCG 155


>emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/81 (80%), Positives = 75/81 (92%)
 Frame = +3

Query: 6   TSLIDGYVEKDQIDKALSVFLELKRQGIEPNEFTFSTLIKACANQAALEQGAQLHAQVIK 185
           T LIDGYVE +QI+K LSVF+EL+RQGIEPNEFTFS+LIKACANQAALEQG QLHAQV+K
Sbjct: 213 TCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMK 272

Query: 186 SHLEKDPFVSSVLVDMYGKCG 248
            + ++DPFVSS+LVDMYGKCG
Sbjct: 273 INFDEDPFVSSILVDMYGKCG 293



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/81 (35%), Positives = 47/81 (58%)
 Frame = +3

Query: 6   TSLIDGYVEKDQIDKALSVFLELKRQGIEPNEFTFSTLIKACANQAALEQGAQLHAQVIK 185
           T++I G  +  +  +A+  F  ++  G  P +F FS+ I+ACA+  ++E G Q+H   +K
Sbjct: 10  TAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALK 69

Query: 186 SHLEKDPFVSSVLVDMYGKCG 248
             +  + FV S L DMY KCG
Sbjct: 70  FGIGSELFVGSNLEDMYSKCG 90


>emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/81 (80%), Positives = 75/81 (92%)
 Frame = +3

Query: 6   TSLIDGYVEKDQIDKALSVFLELKRQGIEPNEFTFSTLIKACANQAALEQGAQLHAQVIK 185
           T LIDGYVE +QI+K LSVF+EL+RQGIEPNEFTFS+LIKACANQAALEQG QLHAQV+K
Sbjct: 278 TCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMK 337

Query: 186 SHLEKDPFVSSVLVDMYGKCG 248
            + ++DPFVSS+LVDMYGKCG
Sbjct: 338 INFDEDPFVSSILVDMYGKCG 358



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/81 (35%), Positives = 47/81 (58%)
 Frame = +3

Query: 6   TSLIDGYVEKDQIDKALSVFLELKRQGIEPNEFTFSTLIKACANQAALEQGAQLHAQVIK 185
           T++I G  +  +  +A+  F  ++  G  P +F FS+ I+ACA+  ++E G Q+H   +K
Sbjct: 75  TAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALK 134

Query: 186 SHLEKDPFVSSVLVDMYGKCG 248
             +  + FV S L DMY KCG
Sbjct: 135 FGIGSELFVGSNLEDMYSKCG 155


>ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  129 bits (325), Expect = 2e-28
 Identities = 59/81 (72%), Positives = 73/81 (90%)
 Frame = +3

Query: 6   TSLIDGYVEKDQIDKALSVFLELKRQGIEPNEFTFSTLIKACANQAALEQGAQLHAQVIK 185
           T++IDGYVE DQI+KALS F++L+R+GIEPNEFTF++LIKACANQA LE G+QLH QV+K
Sbjct: 348 TAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVK 407

Query: 186 SHLEKDPFVSSVLVDMYGKCG 248
            + ++DPFVSS LVDMYGKCG
Sbjct: 408 FNFKRDPFVSSTLVDMYGKCG 428



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/81 (35%), Positives = 48/81 (59%)
 Frame = +3

Query: 6   TSLIDGYVEKDQIDKALSVFLELKRQGIEPNEFTFSTLIKACANQAALEQGAQLHAQVIK 185
           TS+I G+    +  +ALS F +++ +G    +F  S++++AC +  A++ G Q+H  V+K
Sbjct: 145 TSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVK 204

Query: 186 SHLEKDPFVSSVLVDMYGKCG 248
                + FV S L DMY KCG
Sbjct: 205 CGFGCELFVGSNLTDMYSKCG 225



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/81 (30%), Positives = 44/81 (54%)
 Frame = +3

Query: 6   TSLIDGYVEKDQIDKALSVFLELKRQGIEPNEFTFSTLIKACANQAALEQGAQLHAQVIK 185
           TS+IDG+V+     KAL+ ++++    +  ++    + + AC+   A   G  LHA ++K
Sbjct: 246 TSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILK 305

Query: 186 SHLEKDPFVSSVLVDMYGKCG 248
              E + F+ + L DMY K G
Sbjct: 306 LGFEYETFIGNALTDMYSKSG 326


>ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/81 (72%), Positives = 70/81 (86%)
 Frame = +3

Query: 6   TSLIDGYVEKDQIDKALSVFLELKRQGIEPNEFTFSTLIKACANQAALEQGAQLHAQVIK 185
           TSLIDGY+E D I+KAL +F+EL+RQG+EPNEFTFS++IK CA QA LEQGAQLHA+VIK
Sbjct: 292 TSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIK 351

Query: 186 SHLEKDPFVSSVLVDMYGKCG 248
           + L  D FVSS L+DMYGKCG
Sbjct: 352 TSLISDSFVSSTLLDMYGKCG 372



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 29/81 (35%), Positives = 43/81 (53%)
 Frame = +3

Query: 6   TSLIDGYVEKDQIDKALSVFLELKRQGIEPNEFTFSTLIKACANQAALEQGAQLHAQVIK 185
           T+L+ G  +      AL+ F  + R G+ P +F  S+  +A A  AA   GAQLH   ++
Sbjct: 88  TTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHCVGVR 147

Query: 186 SHLEKDPFVSSVLVDMYGKCG 248
              + + FV+S L DMY K G
Sbjct: 148 LGFDAELFVASNLADMYSKSG 168