BLASTX nr result

ID: Coptis24_contig00035716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035716
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273906.2| PREDICTED: putative syntaxin-131-like [Vitis...   372   e-101
emb|CBI28948.3| unnamed protein product [Vitis vinifera]              372   e-101
ref|XP_002325846.1| predicted protein [Populus trichocarpa] gi|2...   350   2e-94
ref|XP_002529743.1| syntaxin, putative [Ricinus communis] gi|223...   350   4e-94
ref|XP_002266162.1| PREDICTED: putative syntaxin-131 [Vitis vini...   345   1e-92

>ref|XP_002273906.2| PREDICTED: putative syntaxin-131-like [Vitis vinifera]
          Length = 304

 Score =  372 bits (955), Expect = e-101
 Identities = 197/296 (66%), Positives = 229/296 (77%), Gaps = 3/296 (1%)
 Frame = +3

Query: 3   SFVLGDKEKPKKEKNIEMG---LPISSDSGMEPFFKQVRELEKQMDKLTELLQKLQDANE 173
           SFV   K +P KE++IEMG   L  +SD G+E F KQ++E+EKQ+DKLT LL+KL+DANE
Sbjct: 8   SFVGDAKVQPPKERDIEMGTRVLRTNSDLGLEAFNKQIQEVEKQVDKLTFLLKKLKDANE 67

Query: 174 ETKSVTKASTMKGIKQRMAKDIDEVGKIARKIKAKLDEIDKDNAANRQKPGCGKGTASDR 353
           E+KSVTKAS MK IK+R+ KD+DEVGKIA+ +KAKL+ I++DN ANR+KPGC KGT  DR
Sbjct: 68  ESKSVTKASAMKEIKKRLEKDVDEVGKIAQNVKAKLEAINRDNLANRKKPGCEKGTGVDR 127

Query: 354 SRVATTNSLKKKLKERMTDFQILRKNIQDXXXXXXXXXXFTVTGNRPDEETIDELIDTGN 533
           SR   TN+L KK K+ M DFQ LR+ +QD           TVTG RPDEETID LI+TGN
Sbjct: 128 SRKNMTNALTKKFKDLMIDFQALRQKMQDEYREVVERRVMTVTGTRPDEETIDNLIETGN 187

Query: 534 SEQIFQKAIQEMGRGQVLDTVEEIQERHDTVKEIEKKLLDLHQVFLDMAVLVQAQGDLLD 713
           SEQIFQKAIQEMGRGQVL T+EEIQERHDTVKEIEKKLLDLHQ++LDMAVLV+AQGDLL+
Sbjct: 188 SEQIFQKAIQEMGRGQVLATLEEIQERHDTVKEIEKKLLDLHQIYLDMAVLVEAQGDLLN 247

Query: 714 NIEIQVTNAVDHVQSGNDALKTAKSLQKKSRKCMMXXXXXXXXXXXXXXXXXXKPW 881
           NIE QVTNAVDHVQ G DAL+TAKSLQKKSRKCMM                  KPW
Sbjct: 248 NIENQVTNAVDHVQWGTDALRTAKSLQKKSRKCMMFAIILILIIAAIITLSVLKPW 303


>emb|CBI28948.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  372 bits (955), Expect = e-101
 Identities = 197/296 (66%), Positives = 229/296 (77%), Gaps = 3/296 (1%)
 Frame = +3

Query: 3   SFVLGDKEKPKKEKNIEMG---LPISSDSGMEPFFKQVRELEKQMDKLTELLQKLQDANE 173
           SFV   K +P KE++IEMG   L  +SD G+E F KQ++E+EKQ+DKLT LL+KL+DANE
Sbjct: 104 SFVGDAKVQPPKERDIEMGTRVLRTNSDLGLEAFNKQIQEVEKQVDKLTFLLKKLKDANE 163

Query: 174 ETKSVTKASTMKGIKQRMAKDIDEVGKIARKIKAKLDEIDKDNAANRQKPGCGKGTASDR 353
           E+KSVTKAS MK IK+R+ KD+DEVGKIA+ +KAKL+ I++DN ANR+KPGC KGT  DR
Sbjct: 164 ESKSVTKASAMKEIKKRLEKDVDEVGKIAQNVKAKLEAINRDNLANRKKPGCEKGTGVDR 223

Query: 354 SRVATTNSLKKKLKERMTDFQILRKNIQDXXXXXXXXXXFTVTGNRPDEETIDELIDTGN 533
           SR   TN+L KK K+ M DFQ LR+ +QD           TVTG RPDEETID LI+TGN
Sbjct: 224 SRKNMTNALTKKFKDLMIDFQALRQKMQDEYREVVERRVMTVTGTRPDEETIDNLIETGN 283

Query: 534 SEQIFQKAIQEMGRGQVLDTVEEIQERHDTVKEIEKKLLDLHQVFLDMAVLVQAQGDLLD 713
           SEQIFQKAIQEMGRGQVL T+EEIQERHDTVKEIEKKLLDLHQ++LDMAVLV+AQGDLL+
Sbjct: 284 SEQIFQKAIQEMGRGQVLATLEEIQERHDTVKEIEKKLLDLHQIYLDMAVLVEAQGDLLN 343

Query: 714 NIEIQVTNAVDHVQSGNDALKTAKSLQKKSRKCMMXXXXXXXXXXXXXXXXXXKPW 881
           NIE QVTNAVDHVQ G DAL+TAKSLQKKSRKCMM                  KPW
Sbjct: 344 NIENQVTNAVDHVQWGTDALRTAKSLQKKSRKCMMFAIILILIIAAIITLSVLKPW 399


>ref|XP_002325846.1| predicted protein [Populus trichocarpa] gi|222862721|gb|EEF00228.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  350 bits (899), Expect = 2e-94
 Identities = 182/286 (63%), Positives = 220/286 (76%)
 Frame = +3

Query: 45  NIEMGLPISSDSGMEPFFKQVRELEKQMDKLTELLQKLQDANEETKSVTKASTMKGIKQR 224
           +IEMG+  S+D G+E FFK+V+E+EKQ +KL +LL+KLQDA+EE+K+VTKA  MKGIKQR
Sbjct: 21  DIEMGMN-SADLGLESFFKKVQEIEKQNEKLDKLLKKLQDAHEESKAVTKAPAMKGIKQR 79

Query: 225 MAKDIDEVGKIARKIKAKLDEIDKDNAANRQKPGCGKGTASDRSRVATTNSLKKKLKERM 404
           M KD+DEVGKIAR IK+KL+E+DK+N +NRQKPGCGKGT  DRSR +TT +LKKKLK++M
Sbjct: 80  MEKDVDEVGKIARSIKSKLEELDKENLSNRQKPGCGKGTGVDRSRTSTTIALKKKLKDKM 139

Query: 405 TDFQILRKNIQDXXXXXXXXXXFTVTGNRPDEETIDELIDTGNSEQIFQKAIQEMGRGQV 584
            +FQ LR+NI            FTVTG R DEETID LI+TG+SEQIFQKAIQE GRGQ+
Sbjct: 140 AEFQTLRENIHQEYREVVERRVFTVTGTRADEETIDTLIETGDSEQIFQKAIQEQGRGQI 199

Query: 585 LDTVEEIQERHDTVKEIEKKLLDLHQVFLDMAVLVQAQGDLLDNIEIQVTNAVDHVQSGN 764
            DT+ EIQERHD V+++E+KLLDL Q+FLDMAVLV AQGD+LDNIE QV+NAVDHVQSGN
Sbjct: 200 TDTLAEIQERHDAVRDLERKLLDLQQIFLDMAVLVDAQGDMLDNIESQVSNAVDHVQSGN 259

Query: 765 DALKTAKSLQKKSRKCMMXXXXXXXXXXXXXXXXXXKPWNKGNSGA 902
            AL+ AK LQ+ SRK M                   KPWN  N GA
Sbjct: 260 VALQKAKKLQRNSRKWMCIAIIILLIIVAIIVVTVLKPWN-NNKGA 304


>ref|XP_002529743.1| syntaxin, putative [Ricinus communis] gi|223530784|gb|EEF32650.1|
           syntaxin, putative [Ricinus communis]
          Length = 308

 Score =  350 bits (897), Expect = 4e-94
 Identities = 183/303 (60%), Positives = 228/303 (75%), Gaps = 3/303 (0%)
 Frame = +3

Query: 3   SFVLGDKEKPKKEKNIEMGLPI---SSDSGMEPFFKQVRELEKQMDKLTELLQKLQDANE 173
           SFV GD ++P    +IEMG+P+   +SD+GME F KQ++E+E+Q+D ++ LL+KL++ANE
Sbjct: 8   SFV-GDAKRPPNNDDIEMGMPMQRSNSDTGMEAFNKQIQEVERQVDMVSGLLKKLKEANE 66

Query: 174 ETKSVTKASTMKGIKQRMAKDIDEVGKIARKIKAKLDEIDKDNAANRQKPGCGKGTASDR 353
           E+KSVTKAS MK IK+RM KD+DEVG+IAR IK K++ I+K+N ANRQKPGC KGT  DR
Sbjct: 67  ESKSVTKASAMKAIKKRMEKDVDEVGRIARAIKTKIEAINKENLANRQKPGCEKGTGVDR 126

Query: 354 SRVATTNSLKKKLKERMTDFQILRKNIQDXXXXXXXXXXFTVTGNRPDEETIDELIDTGN 533
           +R+  TNSL K+ K+ M +FQ LR+ IQ+           TVTG +PDEETID LI+TGN
Sbjct: 127 ARMNVTNSLTKRFKDLMIEFQTLRQKIQNEYREVVERRVITVTGTKPDEETIDNLIETGN 186

Query: 534 SEQIFQKAIQEMGRGQVLDTVEEIQERHDTVKEIEKKLLDLHQVFLDMAVLVQAQGDLLD 713
           SEQIFQKAIQEMGRGQVL+T+EEIQERHD VKEIEKKLLDLHQ++LDMAVLV+AQG++LD
Sbjct: 187 SEQIFQKAIQEMGRGQVLNTLEEIQERHDAVKEIEKKLLDLHQIYLDMAVLVEAQGEILD 246

Query: 714 NIEIQVTNAVDHVQSGNDALKTAKSLQKKSRKCMMXXXXXXXXXXXXXXXXXXKPWNKGN 893
           NIE QV NAV+HVQ+G  AL+ AK LQ+ SRK M                   KPW K N
Sbjct: 247 NIESQVANAVNHVQTGTTALQNAKKLQRNSRKWMCIAIIILLIIVAVIVVGVIKPW-KSN 305

Query: 894 SGA 902
            GA
Sbjct: 306 KGA 308


>ref|XP_002266162.1| PREDICTED: putative syntaxin-131 [Vitis vinifera]
           gi|296089302|emb|CBI39074.3| unnamed protein product
           [Vitis vinifera]
          Length = 307

 Score =  345 bits (884), Expect = 1e-92
 Identities = 177/290 (61%), Positives = 219/290 (75%), Gaps = 3/290 (1%)
 Frame = +3

Query: 36  KEKNIEMG---LPISSDSGMEPFFKQVRELEKQMDKLTELLQKLQDANEETKSVTKASTM 206
           +E +IE+G   L  S + G+E FFK+V+E+EKQ DKL   L+KLQDA+EE+K+VTKA+ M
Sbjct: 18  REGDIELGERALQNSGELGLENFFKKVQEIEKQNDKLNVQLKKLQDAHEESKAVTKAAAM 77

Query: 207 KGIKQRMAKDIDEVGKIARKIKAKLDEIDKDNAANRQKPGCGKGTASDRSRVATTNSLKK 386
           K IK+RM KD+DEVGKIAR IKAK++E+DK+N ANRQKPGCGKGT  DRSR ATT +LKK
Sbjct: 78  KAIKKRMEKDVDEVGKIARSIKAKVEELDKENLANRQKPGCGKGTGVDRSRTATTVALKK 137

Query: 387 KLKERMTDFQILRKNIQDXXXXXXXXXXFTVTGNRPDEETIDELIDTGNSEQIFQKAIQE 566
           K K++M +FQ+LR++I            FTVTG R DEETID LI+TG+SEQIFQKAIQE
Sbjct: 138 KFKDKMAEFQVLRESIHQEYREVVERRVFTVTGTRADEETIDRLIETGDSEQIFQKAIQE 197

Query: 567 MGRGQVLDTVEEIQERHDTVKEIEKKLLDLHQVFLDMAVLVQAQGDLLDNIEIQVTNAVD 746
            GRGQ++DT+ EIQERHD V+E+E+KLLDL Q+FLDMAVLV AQGD+LDNIE QV++AVD
Sbjct: 198 QGRGQIMDTLAEIQERHDAVREVERKLLDLQQIFLDMAVLVDAQGDMLDNIESQVSSAVD 257

Query: 747 HVQSGNDALKTAKSLQKKSRKCMMXXXXXXXXXXXXXXXXXXKPWNKGNS 896
           HVQSGN AL+ AK LQ+ SRK M                   KPW+K  +
Sbjct: 258 HVQSGNTALQRAKKLQRSSRKWMCIAIIILLIIVVIIVVAVLKPWSKNGA 307


Top