BLASTX nr result

ID: Coptis24_contig00035699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035699
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD23047.1| putative non-transporter ABC protein AbcF1 [Oryz...    58   7e-07
dbj|BAD23048.1| putative ABC transporter [Oryza sativa Japonica ...    58   7e-07
ref|XP_003555682.1| PREDICTED: ABC transporter F family member 3...    58   7e-07
ref|XP_003601462.1| ABC transporter family protein [Medicago tru...    58   7e-07
ref|XP_002454815.1| hypothetical protein SORBIDRAFT_04g037970 [S...    58   7e-07

>dbj|BAD23047.1| putative non-transporter ABC protein AbcF1 [Oryza sativa Japonica
           Group]
          Length = 382

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +3

Query: 102 PQL*VSGGQKSRVAFAEIAFKKPHIILLDEPSIHL 206
           P   +SGGQKSRVAFA+I FKKPHIILLDEPS HL
Sbjct: 288 PMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHL 322


>dbj|BAD23048.1| putative ABC transporter [Oryza sativa Japonica Group]
          Length = 692

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +3

Query: 102 PQL*VSGGQKSRVAFAEIAFKKPHIILLDEPSIHL 206
           P   +SGGQKSRVAFA+I FKKPHIILLDEPS HL
Sbjct: 628 PMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHL 662


>ref|XP_003555682.1| PREDICTED: ABC transporter F family member 3-like [Glycine max]
          Length = 712

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +3

Query: 102 PQL*VSGGQKSRVAFAEIAFKKPHIILLDEPSIHL 206
           P   +SGGQKSRVAFA+I FKKPHIILLDEPS HL
Sbjct: 617 PMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHL 651


>ref|XP_003601462.1| ABC transporter family protein [Medicago truncatula]
           gi|355490510|gb|AES71713.1| ABC transporter family
           protein [Medicago truncatula]
          Length = 713

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +3

Query: 102 PQL*VSGGQKSRVAFAEIAFKKPHIILLDEPSIHL 206
           P   +SGGQKSRVAFA+I FKKPHIILLDEPS HL
Sbjct: 618 PMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHL 652


>ref|XP_002454815.1| hypothetical protein SORBIDRAFT_04g037970 [Sorghum bicolor]
           gi|241934646|gb|EES07791.1| hypothetical protein
           SORBIDRAFT_04g037970 [Sorghum bicolor]
          Length = 720

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +3

Query: 102 PQL*VSGGQKSRVAFAEIAFKKPHIILLDEPSIHL 206
           P   +SGGQKSRVAFA+I FKKPHIILLDEPS HL
Sbjct: 627 PMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHL 661


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