BLASTX nr result

ID: Coptis24_contig00035681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035681
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34150.3| unnamed protein product [Vitis vinifera]               85   7e-15
ref|XP_002263190.1| PREDICTED: coproporphyrinogen-III oxidase, c...    85   7e-15
emb|CAN76809.1| hypothetical protein VITISV_044041 [Vitis vinifera]    85   7e-15
gb|ABR16358.1| unknown [Picea sitchensis]                              84   9e-15
ref|XP_003618085.1| Coproporphyrinogen-III oxidase [Medicago tru...    84   1e-14

>emb|CBI34150.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 35/43 (81%), Positives = 37/43 (86%)
 Frame = +3

Query: 168 DAPGGVDGVPRQWWFGGGTDLTPAYIFEEDVKHFHTVQKTVCD 296
           DAP    G PRQWWFGGGTDLTPAYIFEEDVKHFH+VQK+ CD
Sbjct: 118 DAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSVQKSACD 160


>ref|XP_002263190.1| PREDICTED: coproporphyrinogen-III oxidase, chloroplastic-like
           [Vitis vinifera]
          Length = 401

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 35/43 (81%), Positives = 37/43 (86%)
 Frame = +3

Query: 168 DAPGGVDGVPRQWWFGGGTDLTPAYIFEEDVKHFHTVQKTVCD 296
           DAP    G PRQWWFGGGTDLTPAYIFEEDVKHFH+VQK+ CD
Sbjct: 212 DAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSVQKSACD 254


>emb|CAN76809.1| hypothetical protein VITISV_044041 [Vitis vinifera]
          Length = 345

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 35/43 (81%), Positives = 37/43 (86%)
 Frame = +3

Query: 168 DAPGGVDGVPRQWWFGGGTDLTPAYIFEEDVKHFHTVQKTVCD 296
           DAP    G PRQWWFGGGTDLTPAYIFEEDVKHFH+VQK+ CD
Sbjct: 156 DAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSVQKSACD 198


>gb|ABR16358.1| unknown [Picea sitchensis]
          Length = 393

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 34/43 (79%), Positives = 37/43 (86%)
 Frame = +3

Query: 168 DAPGGVDGVPRQWWFGGGTDLTPAYIFEEDVKHFHTVQKTVCD 296
           DAP  V+G PRQWWFGGGTDLTP+Y+FEEDVKHFH VQK  CD
Sbjct: 202 DAPKDVEGAPRQWWFGGGTDLTPSYVFEEDVKHFHMVQKQACD 244


>ref|XP_003618085.1| Coproporphyrinogen-III oxidase [Medicago truncatula]
           gi|355519420|gb|AET01044.1| Coproporphyrinogen-III
           oxidase [Medicago truncatula]
          Length = 399

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 35/43 (81%), Positives = 36/43 (83%)
 Frame = +3

Query: 168 DAPGGVDGVPRQWWFGGGTDLTPAYIFEEDVKHFHTVQKTVCD 296
           DAP    G PRQWWFGGGTDLTPAYIFEEDVKHFH+VQK  CD
Sbjct: 210 DAPKDAPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSVQKQACD 252


Top