BLASTX nr result

ID: Coptis24_contig00035671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035671
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265237.1| PREDICTED: U-box domain-containing protein 4...   172   3e-41
emb|CAN65599.1| hypothetical protein VITISV_025370 [Vitis vinifera]   172   3e-41
emb|CBI40896.3| unnamed protein product [Vitis vinifera]              171   7e-41
ref|XP_002265222.1| PREDICTED: U-box domain-containing protein 4...   171   7e-41
ref|XP_002304783.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40

>ref|XP_002265237.1| PREDICTED: U-box domain-containing protein 43-like [Vitis vinifera]
          Length = 882

 Score =  172 bits (435), Expect = 3e-41
 Identities = 94/154 (61%), Positives = 118/154 (76%)
 Frame = -1

Query: 464 LDVDGVGLKLKCGDDEKLKCTLLGLRHLLTEKMVSNESVIEEDIIPILVNRLASSKQDNR 285
           LD+D V L+LK G+D++ K  L GLR L+ ++MV +E + +E +I IL NRL SSK +NR
Sbjct: 222 LDIDDVVLQLKYGNDDEFKFALSGLRSLIRDQMVDDEWINDEGVILILSNRLGSSKPNNR 281

Query: 284 FNIIVVLRILASENDDNKEKMADVESLRTLVRSLTRDAEERRETVGLLLSLSEIPAVRKR 105
             II +LR L  EN  NKEK+AD  SL T+V+SLTRD EERRE VGLLL LS++PAV +R
Sbjct: 282 LTIIQMLRNLV-ENAKNKEKLADPNSLSTIVKSLTRDVEERREAVGLLLDLSDLPAVHRR 340

Query: 104 IGRIQGCIVMLVALLNGDDRLASKDARMLLRALS 3
           IGRIQGCIVMLVA+LNG+D +AS+DA  LL ALS
Sbjct: 341 IGRIQGCIVMLVAILNGEDPVASRDAGKLLSALS 374


>emb|CAN65599.1| hypothetical protein VITISV_025370 [Vitis vinifera]
          Length = 882

 Score =  172 bits (435), Expect = 3e-41
 Identities = 94/154 (61%), Positives = 118/154 (76%)
 Frame = -1

Query: 464 LDVDGVGLKLKCGDDEKLKCTLLGLRHLLTEKMVSNESVIEEDIIPILVNRLASSKQDNR 285
           LD+D V L+LK G+D++ K  L GLR L+ ++MV +E + +E +I IL NRL SSK +NR
Sbjct: 222 LDIDDVVLQLKYGNDDEFKFALSGLRSLIRDQMVDDEWINDEGVILILSNRLGSSKPNNR 281

Query: 284 FNIIVVLRILASENDDNKEKMADVESLRTLVRSLTRDAEERRETVGLLLSLSEIPAVRKR 105
             II +LR L  EN  NKEK+AD  SL T+V+SLTRD EERRE VGLLL LS++PAV +R
Sbjct: 282 LTIIQMLRNLV-ENAKNKEKLADPNSLSTIVKSLTRDVEERREAVGLLLDLSDLPAVHRR 340

Query: 104 IGRIQGCIVMLVALLNGDDRLASKDARMLLRALS 3
           IGRIQGCIVMLVA+LNG+D +AS+DA  LL ALS
Sbjct: 341 IGRIQGCIVMLVAILNGEDPVASRDAGKLLSALS 374


>emb|CBI40896.3| unnamed protein product [Vitis vinifera]
          Length = 643

 Score =  171 bits (432), Expect = 7e-41
 Identities = 93/154 (60%), Positives = 117/154 (75%)
 Frame = -1

Query: 464 LDVDGVGLKLKCGDDEKLKCTLLGLRHLLTEKMVSNESVIEEDIIPILVNRLASSKQDNR 285
           LD+D V L+LK G+DE+ K  L GLR L+ ++MV +E + +E ++ IL NRL SSK +NR
Sbjct: 54  LDIDDVVLQLKYGNDEEFKFALSGLRSLIRDQMVDDEWINDEGVVLILSNRLGSSKPNNR 113

Query: 284 FNIIVVLRILASENDDNKEKMADVESLRTLVRSLTRDAEERRETVGLLLSLSEIPAVRKR 105
             II +LR L  EN  NKEK+AD  SL T+V+ LTRD EERRE VGLLL LS++PAV +R
Sbjct: 114 LTIIQMLRNLV-ENAKNKEKLADPNSLSTIVKYLTRDVEERREAVGLLLDLSDLPAVHRR 172

Query: 104 IGRIQGCIVMLVALLNGDDRLASKDARMLLRALS 3
           IGRIQGCIVMLVA+LNG+D +AS+DA  LL ALS
Sbjct: 173 IGRIQGCIVMLVAILNGEDSVASRDAGKLLSALS 206


>ref|XP_002265222.1| PREDICTED: U-box domain-containing protein 43-like [Vitis vinifera]
          Length = 886

 Score =  171 bits (432), Expect = 7e-41
 Identities = 93/154 (60%), Positives = 117/154 (75%)
 Frame = -1

Query: 464 LDVDGVGLKLKCGDDEKLKCTLLGLRHLLTEKMVSNESVIEEDIIPILVNRLASSKQDNR 285
           LD+D V L+LK G+DE+ K  L GLR L+ ++MV +E + +E ++ IL NRL SSK +NR
Sbjct: 226 LDIDDVVLQLKYGNDEEFKFALSGLRSLIRDQMVDDEWINDEGVVLILSNRLGSSKPNNR 285

Query: 284 FNIIVVLRILASENDDNKEKMADVESLRTLVRSLTRDAEERRETVGLLLSLSEIPAVRKR 105
             II +LR L  EN  NKEK+AD  SL T+V+ LTRD EERRE VGLLL LS++PAV +R
Sbjct: 286 LTIIQMLRNLV-ENAKNKEKLADPNSLSTIVKYLTRDVEERREAVGLLLDLSDLPAVHRR 344

Query: 104 IGRIQGCIVMLVALLNGDDRLASKDARMLLRALS 3
           IGRIQGCIVMLVA+LNG+D +AS+DA  LL ALS
Sbjct: 345 IGRIQGCIVMLVAILNGEDSVASRDAGKLLSALS 378


>ref|XP_002304783.1| predicted protein [Populus trichocarpa] gi|222842215|gb|EEE79762.1|
           predicted protein [Populus trichocarpa]
          Length = 848

 Score =  170 bits (431), Expect = 1e-40
 Identities = 93/154 (60%), Positives = 112/154 (72%)
 Frame = -1

Query: 464 LDVDGVGLKLKCGDDEKLKCTLLGLRHLLTEKMVSNESVIEEDIIPILVNRLASSKQDNR 285
           L +D V L+LK G+DE+ +  LL L   + ++++  E + EEDIIPIL NRL SSK  NR
Sbjct: 187 LSIDDVVLQLKYGNDEEFRLALLVLSDFIRDQVIDKEWIHEEDIIPILFNRLGSSKPHNR 246

Query: 284 FNIIVVLRILASENDDNKEKMADVESLRTLVRSLTRDAEERRETVGLLLSLSEIPAVRKR 105
             II +LRILA +ND+NKEKM DV  L  LV+SL RDA+E RE VGLL  LS+I AVR+R
Sbjct: 247 LTIIQILRILALDNDENKEKMTDVVCLSGLVKSLARDADEGREAVGLLSELSDISAVRRR 306

Query: 104 IGRIQGCIVMLVALLNGDDRLASKDARMLLRALS 3
           IGRIQGCIVMLV +LNGDD  AS DA  LL ALS
Sbjct: 307 IGRIQGCIVMLVTMLNGDDPTASHDAAKLLIALS 340


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