BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035657
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containi...   128   5e-28
emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]   126   2e-27
emb|CAN68290.1| hypothetical protein VITISV_019715 [Vitis vinifera]   126   2e-27
emb|CAN83751.1| hypothetical protein VITISV_040023 [Vitis vinifera]   119   3e-25
emb|CBI29019.3| unnamed protein product [Vitis vinifera]              110   2e-22

>ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  128 bits (321), Expect = 5e-28
 Identities = 60/80 (75%), Positives = 71/80 (88%)
 Frame = -3

Query: 240 MPERNVVSWNSMLAGYVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELF 61
           MPERN+VSWNSMLAG+VKCG+VE A G+F +MP RDVVSWN+MLACYAQ GK NEA+ LF
Sbjct: 318 MPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALF 377

Query: 60  NEMQGLGVKPTEATVVSLSS 1
           ++M+ +GVKPTEATVVSL S
Sbjct: 378 DQMRAVGVKPTEATVVSLLS 397



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/78 (35%), Positives = 45/78 (57%)
 Frame = -3

Query: 234 ERNVVSWNSMLAGYVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELFNE 55
           E N +   +++  Y KCG +  A  +F  M  +DV++WN ++A  A  G   EA +LF E
Sbjct: 421 EVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKE 480

Query: 54  MQGLGVKPTEATVVSLSS 1
           M+  GV+P + T V++ S
Sbjct: 481 MKEAGVEPNDITFVAILS 498


>emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
          Length = 643

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/80 (73%), Positives = 71/80 (88%)
 Frame = -3

Query: 240 MPERNVVSWNSMLAGYVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELF 61
           MPERN+VSWNSML+G+VKCG+VE A G+F +MP RDVVSWN+MLACYAQ GK NEA+ LF
Sbjct: 123 MPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALF 182

Query: 60  NEMQGLGVKPTEATVVSLSS 1
           ++M+ +GVKPTEATVVSL S
Sbjct: 183 DQMRAVGVKPTEATVVSLLS 202



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/78 (34%), Positives = 44/78 (56%)
 Frame = -3

Query: 234 ERNVVSWNSMLAGYVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELFNE 55
           E N +   +++  Y KCG +  A  +F  M  +DV++WN ++A  A  G   EA +LF E
Sbjct: 226 EVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKE 285

Query: 54  MQGLGVKPTEATVVSLSS 1
           M+   V+P + T V++ S
Sbjct: 286 MKEASVEPNDITFVAMLS 303


>emb|CAN68290.1| hypothetical protein VITISV_019715 [Vitis vinifera]
          Length = 717

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/80 (73%), Positives = 70/80 (87%)
 Frame = -3

Query: 240 MPERNVVSWNSMLAGYVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELF 61
           MPERN+VSWNSMLAG+VKCG+VE A G+F +MP RDVVSWN+MLACYAQ GK NE + LF
Sbjct: 322 MPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEVLALF 381

Query: 60  NEMQGLGVKPTEATVVSLSS 1
           ++M+ +GVKPTEATVVSL S
Sbjct: 382 DQMRAVGVKPTEATVVSLLS 401



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/61 (50%), Positives = 44/61 (72%)
 Frame = -3

Query: 234 ERNVVSWNSMLAGYVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELFNE 55
           +R++VSWN+M+ GYVK G++  A  +F +M  RDV+SWN M+  YA  GK +EA  LF+E
Sbjct: 262 DRDLVSWNAMIDGYVKRGEMGHARIVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDE 321

Query: 54  M 52
           M
Sbjct: 322 M 322


>emb|CAN83751.1| hypothetical protein VITISV_040023 [Vitis vinifera]
          Length = 496

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/80 (71%), Positives = 68/80 (85%)
 Frame = -3

Query: 240 MPERNVVSWNSMLAGYVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELF 61
           MPERN+VS NSML G+VKCG+VE A G+F +MP RDVVSWN+MLACYAQ GK NEA+ LF
Sbjct: 122 MPERNLVSXNSMLXGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALF 181

Query: 60  NEMQGLGVKPTEATVVSLSS 1
           ++M  +GVKP+EATVVSL S
Sbjct: 182 DQMXAVGVKPSEATVVSLLS 201



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/61 (50%), Positives = 44/61 (72%)
 Frame = -3

Query: 234 ERNVVSWNSMLAGYVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELFNE 55
           +R++VSWN+M+ GYVK G++  A  +F +M  RDV+SWN M+  YA  GK +EA  LF+E
Sbjct: 62  DRDLVSWNAMIDGYVKRGEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDE 121

Query: 54  M 52
           M
Sbjct: 122 M 122



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/78 (35%), Positives = 45/78 (57%)
 Frame = -3

Query: 234 ERNVVSWNSMLAGYVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELFNE 55
           E N +   +++  Y KCG +  A  +F  M  +DV++WN ++A  A  G   EA +LF E
Sbjct: 225 EVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAILGHVKEAQQLFKE 284

Query: 54  MQGLGVKPTEATVVSLSS 1
           M+  GV+P + T V++ S
Sbjct: 285 MKEAGVEPNDITFVAMLS 302


>emb|CBI29019.3| unnamed protein product [Vitis vinifera]
          Length = 408

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/76 (65%), Positives = 62/76 (81%)
 Frame = -3

Query: 240 MPERNVVSWNSMLAGYVKCGDVEGAHGIFYKMPRRDVVSWNAMLACYAQSGKSNEAMELF 61
           MPERN+VSWNSML+G+VKCG+VE A G+F +MP RDVVSWN+MLACYAQ GK NEA+ LF
Sbjct: 1   MPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALF 60

Query: 60  NEMQGLGVKPTEATVV 13
           ++MQ +GV     T +
Sbjct: 61  DQMQAVGVNSIVGTAL 76



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/113 (33%), Positives = 52/113 (46%), Gaps = 33/113 (29%)
 Frame = -3

Query: 240 MPERNVVSWNSMLAGYV---------------------------------KCGDVEGAHG 160
           MP R+VVSWNSMLA Y                                  KCG +  A  
Sbjct: 32  MPCRDVVSWNSMLACYAQCGKPNEALALFDQMQAVGVNSIVGTALVDMYAKCGKISLATQ 91

Query: 159 IFYKMPRRDVVSWNAMLACYAQSGKSNEAMELFNEMQGLGVKPTEATVVSLSS 1
           +F  M  +DV++WN ++A  A  G   EA +LF EM+  GV+P + T V++ S
Sbjct: 92  VFNAMESKDVLAWNTIIAGMAILGHVKEAQQLFKEMKEAGVEPNDITFVAMLS 144