BLASTX nr result

ID: Coptis24_contig00035650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035650
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                 60   1e-07

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/74 (37%), Positives = 45/74 (60%)
 Frame = +1

Query: 157 PLNPSAPFQPPSSMMNNTDYSTSTSFTQNPSLAIQNISNFVTVKLNRENYILWNSVFIPF 336
           P NP++P   P S+++N    T  +      ++I N++  V  KLNR+NYI W S+FIP 
Sbjct: 240 PANPNSPANLPPSVLSNPPIMTLGT------ISITNVAGMVPTKLNRQNYITWRSLFIPV 293

Query: 337 PKIFNLVGIIDGSE 378
            K F L+G+++G +
Sbjct: 294 LKRFKLIGLVNGED 307


Top