BLASTX nr result

ID: Coptis24_contig00035648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035648
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278135.1| PREDICTED: putative disease resistance prote...   125   4e-27
emb|CAN62186.1| hypothetical protein VITISV_003708 [Vitis vinifera]   124   8e-27
ref|XP_002318063.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_003633826.1| PREDICTED: disease resistance protein RPM1-l...   117   1e-24
ref|XP_003633827.1| PREDICTED: disease resistance protein RPM1-l...   116   2e-24

>ref|XP_002278135.1| PREDICTED: putative disease resistance protein At1g58400-like
           [Vitis vinifera]
          Length = 653

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/106 (59%), Positives = 81/106 (76%)
 Frame = -3

Query: 377 KFLRVLDLEDVHIKNIPDELGDMIHLRYLGLKNSDIDALPESVTNLRNLQTLDIRWNGKI 198
           KFLRVLDLED  IK++PDE+GD++HLRYLGLK + I+ LPE + NLR LQTLDIRW G +
Sbjct: 305 KFLRVLDLEDSKIKHLPDEVGDLMHLRYLGLKKTHINELPERLGNLRALQTLDIRWCGNL 364

Query: 197 TDISSSILKLVQLRHLKMFKNWGINGVREILVPTDIGRSENLQTFT 60
           T++   +L L++LRHLKMFK+ GI G+    VP  IGR ++L T T
Sbjct: 365 TEVPKGVLNLLRLRHLKMFKSIGIGGMD---VPKGIGRIKSLLTLT 407


>emb|CAN62186.1| hypothetical protein VITISV_003708 [Vitis vinifera]
          Length = 653

 Score =  124 bits (311), Expect = 8e-27
 Identities = 63/106 (59%), Positives = 80/106 (75%)
 Frame = -3

Query: 377 KFLRVLDLEDVHIKNIPDELGDMIHLRYLGLKNSDIDALPESVTNLRNLQTLDIRWNGKI 198
           KFLRVLDLED  IK++PDE+GD++HLRYLGLK + I+ LPE + NLR LQTLDIRW G +
Sbjct: 305 KFLRVLDLEDSKIKHLPDEVGDLMHLRYLGLKKTHINELPERLGNLRALQTLDIRWCGNL 364

Query: 197 TDISSSILKLVQLRHLKMFKNWGINGVREILVPTDIGRSENLQTFT 60
           T +   +L L++LRHLKMFK+ GI G+    VP  IGR ++L T T
Sbjct: 365 TXVPKGVLNLLRLRHLKMFKSIGIGGMD---VPKGIGRIKSLLTLT 407


>ref|XP_002318063.1| predicted protein [Populus trichocarpa] gi|222858736|gb|EEE96283.1|
           predicted protein [Populus trichocarpa]
          Length = 583

 Score =  124 bits (310), Expect = 1e-26
 Identities = 65/129 (50%), Positives = 88/129 (68%)
 Frame = -3

Query: 389 FHEKKFLRVLDLEDVHIKNIPDELGDMIHLRYLGLKNSDIDALPESVTNLRNLQTLDIRW 210
           F   KFLRVLDLED  I+ +PDE+ D+IHL YLGLKN+DI+ LP+ + NLR LQ+LDIRW
Sbjct: 224 FEGAKFLRVLDLEDAKIRRLPDEVADLIHLAYLGLKNNDINELPDRLGNLRALQSLDIRW 283

Query: 209 NGKITDISSSILKLVQLRHLKMFKNWGINGVREILVPTDIGRSENLQTFTXXXXXXXXXX 30
            G +T++S+ ILKLV+LRHLKMFK+  ++G++   +P  +G   +L T T          
Sbjct: 284 CGDLTELSTEILKLVRLRHLKMFKSRNVSGMK---LPGGVGTLGSLLTLTGVHAGGEIAG 340

Query: 29  XXXXLTQLK 3
               LTQL+
Sbjct: 341 ELRKLTQLR 349


>ref|XP_003633826.1| PREDICTED: disease resistance protein RPM1-like [Vitis vinifera]
          Length = 685

 Score =  117 bits (293), Expect = 1e-24
 Identities = 60/120 (50%), Positives = 87/120 (72%)
 Frame = -3

Query: 425 LSDAALDSLRPVFHEKKFLRVLDLEDVHIKNIPDELGDMIHLRYLGLKNSDIDALPESVT 246
           LS A+ D L  V +  K ++VLDLE+  +K++PDE+G  ++LRYLG+++S+I+ LPES++
Sbjct: 316 LSKASSDCLETVLYNAKRVQVLDLENTQLKSLPDEVGKSVNLRYLGVRHSEINELPESIS 375

Query: 245 NLRNLQTLDIRWNGKITDISSSILKLVQLRHLKMFKNWGINGVREILVPTDIGRSENLQT 66
           NLRNLQTLDI W+G   ++S+ +L L QLRHLK+F+   +N   E+ VP  I R  NLQT
Sbjct: 376 NLRNLQTLDISWSGDEFELSNGVLNLAQLRHLKVFR--PVND-GEVRVPRGISRLRNLQT 432


>ref|XP_003633827.1| PREDICTED: disease resistance protein RPM1-like [Vitis vinifera]
          Length = 590

 Score =  116 bits (290), Expect = 2e-24
 Identities = 64/141 (45%), Positives = 89/141 (63%)
 Frame = -3

Query: 425 LSDAALDSLRPVFHEKKFLRVLDLEDVHIKNIPDELGDMIHLRYLGLKNSDIDALPESVT 246
           LS  + D L  V +  K LRVL LE++ +K++PD +G ++HLRYLG+++S+I  LPES++
Sbjct: 228 LSKPSPDCLETVLYNAKLLRVLHLENIELKSLPD-VGKLVHLRYLGVRHSEITELPESIS 286

Query: 245 NLRNLQTLDIRWNGKITDISSSILKLVQLRHLKMFKNWGINGVREILVPTDIGRSENLQT 66
           NLRNLQTLDI W+G   ++S+ +L LVQLRHL+MF+      VR   VP  I R  NLQT
Sbjct: 287 NLRNLQTLDISWSGNEFELSNGVLNLVQLRHLRMFRPMNDCKVR---VPRGISRLRNLQT 343

Query: 65  FTXXXXXXXXXXXXXXLTQLK 3
                           +TQL+
Sbjct: 344 LNGIYVGGGIAKELGNMTQLR 364


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