BLASTX nr result

ID: Coptis24_contig00035636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035636
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618090.1| ATPase WRNIP1 [Medicago truncatula] gi|35551...   127   9e-28
ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera]    127   9e-28
ref|XP_003545063.1| PREDICTED: ATPase WRNIP1-like [Glycine max]       116   2e-24
ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus]   115   3e-24
ref|XP_002316599.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24

>ref|XP_003618090.1| ATPase WRNIP1 [Medicago truncatula] gi|355519425|gb|AET01049.1|
           ATPase WRNIP1 [Medicago truncatula]
          Length = 551

 Score =  127 bits (319), Expect = 9e-28
 Identities = 76/160 (47%), Positives = 92/160 (57%), Gaps = 23/160 (14%)
 Frame = +3

Query: 24  MELEQLMSMGFSQELATQALAATGGNSTIKATEWILDQKXXXXXXXXX-------FQPKL 182
           ME++QL+SMGF  ELA QALAATGG ST+KATEWIL  K                FQPKL
Sbjct: 1   MEMQQLLSMGFPDELAAQALAATGGKSTVKATEWILTHKPPNSTIHTPSSSPSSAFQPKL 60

Query: 183 NRFF-SPQ---------------TQRKPLSPTINTNPELKLDLFPNPKRTKVQQNPPHHE 314
           +RFF +PQ                +R  LSPT    P          K T ++Q P  HE
Sbjct: 61  DRFFQTPQQPIQAEQQQQQTEEPNKRTKLSPTQQNKPSFFF------KPTSMKQQPQTHE 114

Query: 315 PLSERMRPRNADEIIGQDHILGKNAILRSSLDCNRLPSIV 434
           PL ER+RPR  DE++GQDH+L  N+ILRSS+   RLPSI+
Sbjct: 115 PLYERLRPRTLDEVVGQDHLLSTNSILRSSIQRKRLPSIL 154


>ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera]
          Length = 534

 Score =  127 bits (319), Expect = 9e-28
 Identities = 70/149 (46%), Positives = 91/149 (61%), Gaps = 12/149 (8%)
 Frame = +3

Query: 24  MELEQLMSMGFSQELATQALAATGGNSTIKATEWIL----------DQKXXXXXXXXXFQ 173
           ME EQL+SMGF  +LA+QALAATGG S +KATEWIL          D+          FQ
Sbjct: 1   MEREQLLSMGFPDDLASQALAATGGKSILKATEWILGRNKSDSQTPDENPNSSPSPSPFQ 60

Query: 174 PKLNRFFSPQTQRKPLSPTINTNPELKLDLFPNP--KRTKVQQNPPHHEPLSERMRPRNA 347
           PKL+RFF    Q KP +P             P+P  KR +++     H+PLSERMRPR  
Sbjct: 61  PKLDRFF--HFQSKPSNPPQIQKQHCDTPSLPSPPSKRLRLEAENSPHQPLSERMRPRTV 118

Query: 348 DEIIGQDHILGKNAILRSSLDCNRLPSIV 434
           D+++GQDH+L   ++LRS++D NRLPSI+
Sbjct: 119 DDVVGQDHLLSHKSLLRSAIDSNRLPSII 147


>ref|XP_003545063.1| PREDICTED: ATPase WRNIP1-like [Glycine max]
          Length = 533

 Score =  116 bits (290), Expect = 2e-24
 Identities = 67/149 (44%), Positives = 87/149 (58%), Gaps = 14/149 (9%)
 Frame = +3

Query: 30  LEQLMSMGFSQELATQALAATGGNSTIKATEWILDQKXXXXXXXXXFQPKLNRFFSPQTQ 209
           ++QL+SMGF  ELA QALAATGG ST+KATEWIL  K         FQPKL+RFF  Q+Q
Sbjct: 1   MQQLLSMGFPDELAAQALAATGGKSTVKATEWILSHKPNSST----FQPKLDRFFHSQSQ 56

Query: 210 RKPLSPTINTNPELKLDLFPNPKRTKVQQNPPH--------------HEPLSERMRPRNA 347
                P+    P       P+P   + Q  P                HEPL ER+RPR  
Sbjct: 57  EHD-EPSKRPKPSPS----PSPSPAQPQHWPSFFFKIADKKHANTHIHEPLYERLRPRTL 111

Query: 348 DEIIGQDHILGKNAILRSSLDCNRLPSIV 434
           D+++GQ+H+L  N++LRS++  NRLPSI+
Sbjct: 112 DDVVGQEHLLAPNSLLRSAIQRNRLPSIL 140


>ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus]
          Length = 513

 Score =  115 bits (289), Expect = 3e-24
 Identities = 72/137 (52%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
 Frame = +3

Query: 30  LEQLMSMGFSQELATQALAATGGNSTIKATEWILDQKXXXXXXXXXFQPKLNRFFSPQTQ 209
           +EQL++MGF  ELA QALAATGG ST+KATEWIL+ K                  S    
Sbjct: 1   MEQLVNMGFPDELAAQALAATGGKSTLKATEWILNHK------------------SSSPS 42

Query: 210 RKPLSPTINTNPEL--KLDLFPNPKRTKVQQNPPHHEPLSERMRPRNADEIIGQDHILGK 383
            KP  P I++NP L  KLD F +      Q  PP     SERMRPR  D+++GQDH+L K
Sbjct: 43  PKPNLP-ISSNPNLQPKLDRFFH-----FQPRPPPPSA-SERMRPRTIDDVVGQDHLLAK 95

Query: 384 NAILRSSLDCNRLPSIV 434
           N+ILRSSLDCNRLPSIV
Sbjct: 96  NSILRSSLDCNRLPSIV 112


>ref|XP_002316599.1| predicted protein [Populus trichocarpa] gi|222859664|gb|EEE97211.1|
           predicted protein [Populus trichocarpa]
          Length = 553

 Score =  114 bits (285), Expect = 8e-24
 Identities = 74/166 (44%), Positives = 96/166 (57%), Gaps = 31/166 (18%)
 Frame = +3

Query: 30  LEQLMSMGFSQELATQALAATGGNSTIKATEWILDQKXXXXXXXXXF-----QPKLNRFF 194
           +EQL+SMGF  ELA QALAATGG ST+KATEWIL Q                QPKL+RFF
Sbjct: 1   MEQLLSMGFPSELAAQALAATGGKSTVKATEWILSQTSHPHPNNSPNGSSFQQPKLDRFF 60

Query: 195 ---SPQTQRKPLSPT-----INTNPE--------LKLDLFPNPKRTKV-----QQNPPHH 311
              S + +++P SP+       T P         L     P  KR KV       NP +H
Sbjct: 61  HFPSSKPKQEPSSPSNSPTQTTTAPPPPPPHHQVLSAQTPPPSKRPKVFAPSPPSNPHNH 120

Query: 312 -----EPLSERMRPRNADEIIGQDHILGKNAILRSSLDCNRLPSIV 434
                EPL+ERMRPR  D++IGQD +L +N++LRS++ C+R+PSI+
Sbjct: 121 TISNDEPLAERMRPRTIDDVIGQDLLLSQNSLLRSAIRCSRIPSII 166


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