BLASTX nr result
ID: Coptis24_contig00035636
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035636 (435 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003618090.1| ATPase WRNIP1 [Medicago truncatula] gi|35551... 127 9e-28 ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera] 127 9e-28 ref|XP_003545063.1| PREDICTED: ATPase WRNIP1-like [Glycine max] 116 2e-24 ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus] 115 3e-24 ref|XP_002316599.1| predicted protein [Populus trichocarpa] gi|2... 114 8e-24 >ref|XP_003618090.1| ATPase WRNIP1 [Medicago truncatula] gi|355519425|gb|AET01049.1| ATPase WRNIP1 [Medicago truncatula] Length = 551 Score = 127 bits (319), Expect = 9e-28 Identities = 76/160 (47%), Positives = 92/160 (57%), Gaps = 23/160 (14%) Frame = +3 Query: 24 MELEQLMSMGFSQELATQALAATGGNSTIKATEWILDQKXXXXXXXXX-------FQPKL 182 ME++QL+SMGF ELA QALAATGG ST+KATEWIL K FQPKL Sbjct: 1 MEMQQLLSMGFPDELAAQALAATGGKSTVKATEWILTHKPPNSTIHTPSSSPSSAFQPKL 60 Query: 183 NRFF-SPQ---------------TQRKPLSPTINTNPELKLDLFPNPKRTKVQQNPPHHE 314 +RFF +PQ +R LSPT P K T ++Q P HE Sbjct: 61 DRFFQTPQQPIQAEQQQQQTEEPNKRTKLSPTQQNKPSFFF------KPTSMKQQPQTHE 114 Query: 315 PLSERMRPRNADEIIGQDHILGKNAILRSSLDCNRLPSIV 434 PL ER+RPR DE++GQDH+L N+ILRSS+ RLPSI+ Sbjct: 115 PLYERLRPRTLDEVVGQDHLLSTNSILRSSIQRKRLPSIL 154 >ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera] Length = 534 Score = 127 bits (319), Expect = 9e-28 Identities = 70/149 (46%), Positives = 91/149 (61%), Gaps = 12/149 (8%) Frame = +3 Query: 24 MELEQLMSMGFSQELATQALAATGGNSTIKATEWIL----------DQKXXXXXXXXXFQ 173 ME EQL+SMGF +LA+QALAATGG S +KATEWIL D+ FQ Sbjct: 1 MEREQLLSMGFPDDLASQALAATGGKSILKATEWILGRNKSDSQTPDENPNSSPSPSPFQ 60 Query: 174 PKLNRFFSPQTQRKPLSPTINTNPELKLDLFPNP--KRTKVQQNPPHHEPLSERMRPRNA 347 PKL+RFF Q KP +P P+P KR +++ H+PLSERMRPR Sbjct: 61 PKLDRFF--HFQSKPSNPPQIQKQHCDTPSLPSPPSKRLRLEAENSPHQPLSERMRPRTV 118 Query: 348 DEIIGQDHILGKNAILRSSLDCNRLPSIV 434 D+++GQDH+L ++LRS++D NRLPSI+ Sbjct: 119 DDVVGQDHLLSHKSLLRSAIDSNRLPSII 147 >ref|XP_003545063.1| PREDICTED: ATPase WRNIP1-like [Glycine max] Length = 533 Score = 116 bits (290), Expect = 2e-24 Identities = 67/149 (44%), Positives = 87/149 (58%), Gaps = 14/149 (9%) Frame = +3 Query: 30 LEQLMSMGFSQELATQALAATGGNSTIKATEWILDQKXXXXXXXXXFQPKLNRFFSPQTQ 209 ++QL+SMGF ELA QALAATGG ST+KATEWIL K FQPKL+RFF Q+Q Sbjct: 1 MQQLLSMGFPDELAAQALAATGGKSTVKATEWILSHKPNSST----FQPKLDRFFHSQSQ 56 Query: 210 RKPLSPTINTNPELKLDLFPNPKRTKVQQNPPH--------------HEPLSERMRPRNA 347 P+ P P+P + Q P HEPL ER+RPR Sbjct: 57 EHD-EPSKRPKPSPS----PSPSPAQPQHWPSFFFKIADKKHANTHIHEPLYERLRPRTL 111 Query: 348 DEIIGQDHILGKNAILRSSLDCNRLPSIV 434 D+++GQ+H+L N++LRS++ NRLPSI+ Sbjct: 112 DDVVGQEHLLAPNSLLRSAIQRNRLPSIL 140 >ref|XP_004147772.1| PREDICTED: ATPase WRNIP1-like [Cucumis sativus] Length = 513 Score = 115 bits (289), Expect = 3e-24 Identities = 72/137 (52%), Positives = 85/137 (62%), Gaps = 2/137 (1%) Frame = +3 Query: 30 LEQLMSMGFSQELATQALAATGGNSTIKATEWILDQKXXXXXXXXXFQPKLNRFFSPQTQ 209 +EQL++MGF ELA QALAATGG ST+KATEWIL+ K S Sbjct: 1 MEQLVNMGFPDELAAQALAATGGKSTLKATEWILNHK------------------SSSPS 42 Query: 210 RKPLSPTINTNPEL--KLDLFPNPKRTKVQQNPPHHEPLSERMRPRNADEIIGQDHILGK 383 KP P I++NP L KLD F + Q PP SERMRPR D+++GQDH+L K Sbjct: 43 PKPNLP-ISSNPNLQPKLDRFFH-----FQPRPPPPSA-SERMRPRTIDDVVGQDHLLAK 95 Query: 384 NAILRSSLDCNRLPSIV 434 N+ILRSSLDCNRLPSIV Sbjct: 96 NSILRSSLDCNRLPSIV 112 >ref|XP_002316599.1| predicted protein [Populus trichocarpa] gi|222859664|gb|EEE97211.1| predicted protein [Populus trichocarpa] Length = 553 Score = 114 bits (285), Expect = 8e-24 Identities = 74/166 (44%), Positives = 96/166 (57%), Gaps = 31/166 (18%) Frame = +3 Query: 30 LEQLMSMGFSQELATQALAATGGNSTIKATEWILDQKXXXXXXXXXF-----QPKLNRFF 194 +EQL+SMGF ELA QALAATGG ST+KATEWIL Q QPKL+RFF Sbjct: 1 MEQLLSMGFPSELAAQALAATGGKSTVKATEWILSQTSHPHPNNSPNGSSFQQPKLDRFF 60 Query: 195 ---SPQTQRKPLSPT-----INTNPE--------LKLDLFPNPKRTKV-----QQNPPHH 311 S + +++P SP+ T P L P KR KV NP +H Sbjct: 61 HFPSSKPKQEPSSPSNSPTQTTTAPPPPPPHHQVLSAQTPPPSKRPKVFAPSPPSNPHNH 120 Query: 312 -----EPLSERMRPRNADEIIGQDHILGKNAILRSSLDCNRLPSIV 434 EPL+ERMRPR D++IGQD +L +N++LRS++ C+R+PSI+ Sbjct: 121 TISNDEPLAERMRPRTIDDVIGQDLLLSQNSLLRSAIRCSRIPSII 166