BLASTX nr result

ID: Coptis24_contig00035634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035634
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310767.1| predicted protein [Populus trichocarpa] gi|2...    82   2e-16
ref|XP_002878687.1| predicted protein [Arabidopsis lyrata subsp....    80   2e-16
ref|NP_565553.1| extra-large G-protein 1 [Arabidopsis thaliana] ...    80   2e-16
gb|AAK96856.1| putative GTP-binding protein (extra large) [Arabi...    80   2e-16
ref|XP_003537397.1| PREDICTED: uncharacterized protein LOC100820...    79   3e-16

>ref|XP_002310767.1| predicted protein [Populus trichocarpa] gi|222853670|gb|EEE91217.1|
           predicted protein [Populus trichocarpa]
          Length = 901

 Score = 82.0 bits (201), Expect(2) = 2e-16
 Identities = 38/61 (62%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
 Frame = +3

Query: 45  QMVMEAEK--KMNQLQAEHVYVNGHQLSREELSLLQGCANPPPKLKPGCYWYDKDSGLWG 218
           + +M+AEK  + NQL  E+VYVNG  L  EEL +LQ C NPP K+KPG YWYDK SGLWG
Sbjct: 315 RQIMKAEKLCEANQLPPEYVYVNGEPLCHEELVILQNCLNPPKKMKPGNYWYDKVSGLWG 374

Query: 219 K 221
           K
Sbjct: 375 K 375



 Score = 28.1 bits (61), Expect(2) = 2e-16
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 1   KCSRMLKRLRSEVEVKWLWRLRR 69
           KCSRMLKRL +++EV+ + +  +
Sbjct: 300 KCSRMLKRLLNDLEVRQIMKAEK 322


>ref|XP_002878687.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324526|gb|EFH54946.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 891

 Score = 79.7 bits (195), Expect(2) = 2e-16
 Identities = 38/61 (62%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
 Frame = +3

Query: 45  QMVMEAEK--KMNQLQAEHVYVNGHQLSREELSLLQGCANPPPKLKPGCYWYDKDSGLWG 218
           + +M+ E+  + NQL AE+VYVNG  L  EEL  LQ C+NPP KLKPG YWYDK SGLWG
Sbjct: 303 KQIMKTERFCEANQLPAEYVYVNGQPLYPEELVTLQTCSNPPKKLKPGDYWYDKVSGLWG 362

Query: 219 K 221
           K
Sbjct: 363 K 363



 Score = 30.4 bits (67), Expect(2) = 2e-16
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +1

Query: 1   KCSRMLKRLRSEVEVKWLWRLRR 69
           KCSRMLKRL +++EVK + +  R
Sbjct: 288 KCSRMLKRLLNDLEVKQIMKTER 310


>ref|NP_565553.1| extra-large G-protein 1 [Arabidopsis thaliana]
           gi|3201680|gb|AAC19352.1| extra-large G-protein
           [Arabidopsis thaliana] gi|20197006|gb|AAC23761.2|
           putative GTP-binding protein (extra large) [Arabidopsis
           thaliana] gi|330252364|gb|AEC07458.1| extra-large
           G-protein 1 [Arabidopsis thaliana]
          Length = 888

 Score = 79.7 bits (195), Expect(2) = 2e-16
 Identities = 38/61 (62%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
 Frame = +3

Query: 45  QMVMEAEK--KMNQLQAEHVYVNGHQLSREELSLLQGCANPPPKLKPGCYWYDKDSGLWG 218
           + +M+ E+  + NQL AE+VYVNG  L  EEL  LQ C+NPP KLKPG YWYDK SGLWG
Sbjct: 298 KQIMKTERFCEANQLPAEYVYVNGQPLYPEELVTLQTCSNPPKKLKPGDYWYDKVSGLWG 357

Query: 219 K 221
           K
Sbjct: 358 K 358



 Score = 30.4 bits (67), Expect(2) = 2e-16
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +1

Query: 1   KCSRMLKRLRSEVEVKWLWRLRR 69
           KCSRMLKRL +++EVK + +  R
Sbjct: 283 KCSRMLKRLLNDLEVKQIMKTER 305


>gb|AAK96856.1| putative GTP-binding protein (extra large) [Arabidopsis thaliana]
          Length = 779

 Score = 79.7 bits (195), Expect(2) = 2e-16
 Identities = 38/61 (62%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
 Frame = +3

Query: 45  QMVMEAEK--KMNQLQAEHVYVNGHQLSREELSLLQGCANPPPKLKPGCYWYDKDSGLWG 218
           + +M+ E+  + NQL AE+VYVNG  L  EEL  LQ C+NPP KLKPG YWYDK SGLWG
Sbjct: 298 KQIMKTERFCEANQLPAEYVYVNGQPLYPEELVTLQTCSNPPKKLKPGDYWYDKVSGLWG 357

Query: 219 K 221
           K
Sbjct: 358 K 358



 Score = 30.4 bits (67), Expect(2) = 2e-16
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +1

Query: 1   KCSRMLKRLRSEVEVKWLWRLRR 69
           KCSRMLKRL +++EVK + +  R
Sbjct: 283 KCSRMLKRLLNDLEVKQIMKTER 305


>ref|XP_003537397.1| PREDICTED: uncharacterized protein LOC100820512 [Glycine max]
          Length = 917

 Score = 79.3 bits (194), Expect(2) = 3e-16
 Identities = 38/61 (62%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
 Frame = +3

Query: 45  QMVMEAEK--KMNQLQAEHVYVNGHQLSREELSLLQGCANPPPKLKPGCYWYDKDSGLWG 218
           + +M+AE+  + N L  E+V VNGH LS EEL  LQ C NPP KLKPG YWYDK SGLWG
Sbjct: 323 RQIMKAERFCEANLLPPEYVCVNGHPLSYEELVTLQNCPNPPKKLKPGTYWYDKVSGLWG 382

Query: 219 K 221
           K
Sbjct: 383 K 383



 Score = 30.4 bits (67), Expect(2) = 3e-16
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +1

Query: 1   KCSRMLKRLRSEVEVKWLWRLRR 69
           KCSRMLKRL +E+EV+ + +  R
Sbjct: 308 KCSRMLKRLLNELEVRQIMKAER 330


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