BLASTX nr result

ID: Coptis24_contig00035626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035626
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271201.1| PREDICTED: probable DNA replication complex ...    77   2e-12
ref|NP_001147271.1| TTN10 [Zea mays] gi|195609332|gb|ACG26496.1|...    76   3e-12
gb|AFW65031.1| TTN10 isoform 1 [Zea mays] gi|413925100|gb|AFW650...    76   3e-12
gb|AFW65028.1| hypothetical protein ZEAMMB73_149616 [Zea mays] g...    76   3e-12
gb|ACN35084.1| unknown [Zea mays]                                      76   3e-12

>ref|XP_002271201.1| PREDICTED: probable DNA replication complex GINS protein PSF3
           [Vitis vinifera] gi|147828134|emb|CAN64086.1|
           hypothetical protein VITISV_006937 [Vitis vinifera]
           gi|297736610|emb|CBI25481.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/64 (60%), Positives = 42/64 (65%)
 Frame = +2

Query: 176 MASYYXXXXXXXXXXXXSTVFQIGANGVGMLDPGAERNCVEQGAKVELPFWLAHELHLRQ 355
           MA YY            S VFQ  ANGVG+LDP AE N VEQG+KVELPFWLAHEL  RQ
Sbjct: 1   MAHYYNIDEIIVEEELVSAVFQKAANGVGILDPSAETNSVEQGSKVELPFWLAHELLQRQ 60

Query: 356 AVAV 367
           AV +
Sbjct: 61  AVTI 64


>ref|NP_001147271.1| TTN10 [Zea mays] gi|195609332|gb|ACG26496.1| TTN10 [Zea mays]
           gi|238006936|gb|ACR34503.1| unknown [Zea mays]
           gi|413916860|gb|AFW56792.1| TTN10 [Zea mays]
          Length = 194

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 38/65 (58%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
 Frame = +2

Query: 176 MASYYXXXXXXXXXXXXSTVFQIGANGVGMLDPGAERNCVEQGAKVELPFWLAHE-LHLR 352
           M  YY            S VFQ+ ANGVG+LDPGAE NCVE+GAKV+LPFWLAH  L L 
Sbjct: 1   MRGYYDIDDILMEDEPISVVFQVTANGVGLLDPGAENNCVEKGAKVDLPFWLAHGLLSLE 60

Query: 353 QAVAV 367
           QAV++
Sbjct: 61  QAVSI 65


>gb|AFW65031.1| TTN10 isoform 1 [Zea mays] gi|413925100|gb|AFW65032.1| TTN10
           isoform 2 [Zea mays] gi|413925101|gb|AFW65033.1| TTN10
           isoform 3 [Zea mays]
          Length = 189

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/65 (58%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
 Frame = +2

Query: 176 MASYYXXXXXXXXXXXXSTVFQIGANGVGMLDPGAERNCVEQGAKVELPFWLAHE-LHLR 352
           M  YY            S VFQ+ ANGVG+LDPGAE NCVE+GAKV+LPFWLAH  L L 
Sbjct: 1   MPGYYDIDDILMEDEPISVVFQVTANGVGLLDPGAESNCVEKGAKVDLPFWLAHGLLSLE 60

Query: 353 QAVAV 367
           QAV++
Sbjct: 61  QAVSI 65


>gb|AFW65028.1| hypothetical protein ZEAMMB73_149616 [Zea mays]
           gi|413925097|gb|AFW65029.1| hypothetical protein
           ZEAMMB73_149616 [Zea mays] gi|413925098|gb|AFW65030.1|
           hypothetical protein ZEAMMB73_149616 [Zea mays]
          Length = 74

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/65 (58%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
 Frame = +2

Query: 176 MASYYXXXXXXXXXXXXSTVFQIGANGVGMLDPGAERNCVEQGAKVELPFWLAHE-LHLR 352
           M  YY            S VFQ+ ANGVG+LDPGAE NCVE+GAKV+LPFWLAH  L L 
Sbjct: 1   MPGYYDIDDILMEDEPISVVFQVTANGVGLLDPGAESNCVEKGAKVDLPFWLAHGLLSLE 60

Query: 353 QAVAV 367
           QAV++
Sbjct: 61  QAVSI 65


>gb|ACN35084.1| unknown [Zea mays]
          Length = 189

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/65 (58%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
 Frame = +2

Query: 176 MASYYXXXXXXXXXXXXSTVFQIGANGVGMLDPGAERNCVEQGAKVELPFWLAHE-LHLR 352
           M  YY            S VFQ+ ANGVG+LDPGAE NCVE+GAKV+LPFWLAH  L L 
Sbjct: 1   MPGYYDIDDILMEDEPISVVFQVTANGVGLLDPGAESNCVEKGAKVDLPFWLAHGLLSLE 60

Query: 353 QAVAV 367
           QAV++
Sbjct: 61  QAVSI 65


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