BLASTX nr result

ID: Coptis24_contig00035611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035611
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319678.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002325822.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_002525472.1| syntaxin, putative [Ricinus communis] gi|223...    98   8e-19
emb|CBI20794.3| unnamed protein product [Vitis vinifera]               96   2e-18
ref|XP_002283098.1| PREDICTED: syntaxin-related protein KNOLLE [...    96   2e-18

>ref|XP_002319678.1| predicted protein [Populus trichocarpa] gi|222858054|gb|EEE95601.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/71 (74%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
 Frame = +2

Query: 152 MNDLMTKSFVSYVDLKKEAMKDLEAGPDYSVEMTNATN-VEPNLALFLEGAETVKTEMAS 328
           MNDLMTKSF+SYVDLKKEAMKDLEAGPD  VEM NA+N +E NL +FLE AE VK EM S
Sbjct: 1   MNDLMTKSFMSYVDLKKEAMKDLEAGPDPVVEMANASNTMESNLGMFLEEAENVKKEMGS 60

Query: 329 IRDILGRLQDA 361
           IR+IL +LQ+A
Sbjct: 61  IREILDQLQEA 71


>ref|XP_002325822.1| predicted protein [Populus trichocarpa] gi|222862697|gb|EEF00204.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 51/71 (71%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
 Frame = +2

Query: 152 MNDLMTKSFVSYVDLKKEAMKDLEAGPDYSVEMTNATN-VEPNLALFLEGAETVKTEMAS 328
           MNDLMTKSF+SYVDLKKEAMKDLEAGPD+ +EM NA+N ++ NL LFLE AE VK +M S
Sbjct: 1   MNDLMTKSFMSYVDLKKEAMKDLEAGPDHDLEMANASNTMDSNLGLFLEEAEDVKKKMRS 60

Query: 329 IRDILGRLQDA 361
           IR+IL +LQ+A
Sbjct: 61  IREILDQLQEA 71


>ref|XP_002525472.1| syntaxin, putative [Ricinus communis] gi|223535285|gb|EEF36962.1|
           syntaxin, putative [Ricinus communis]
          Length = 313

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/71 (71%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
 Frame = +2

Query: 152 MNDLMTKSFVSYVDLKKEAMKDLEAGPDYSVEMTNATN-VEPNLALFLEGAETVKTEMAS 328
           MNDLMTKSF SYVDLKKEAM+DLEAGPD  +EM NA+N ++ NL LFLE AE VK EM S
Sbjct: 1   MNDLMTKSFTSYVDLKKEAMRDLEAGPDPDLEMANASNTMDRNLGLFLEEAENVKKEMES 60

Query: 329 IRDILGRLQDA 361
           IRD+L RLQ++
Sbjct: 61  IRDVLVRLQES 71


>emb|CBI20794.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/70 (70%), Positives = 58/70 (82%)
 Frame = +2

Query: 152 MNDLMTKSFVSYVDLKKEAMKDLEAGPDYSVEMTNATNVEPNLALFLEGAETVKTEMASI 331
           MNDLMTKSF+SYVDLKKEAMKDLEAGP+Y ++M + T ++ NL LFLE AE VK EM  I
Sbjct: 1   MNDLMTKSFISYVDLKKEAMKDLEAGPEYDLQM-SGTQMDRNLGLFLEEAEKVKQEMGLI 59

Query: 332 RDILGRLQDA 361
           R+ILGRL +A
Sbjct: 60  REILGRLHEA 69


>ref|XP_002283098.1| PREDICTED: syntaxin-related protein KNOLLE [Vitis vinifera]
          Length = 311

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/70 (70%), Positives = 58/70 (82%)
 Frame = +2

Query: 152 MNDLMTKSFVSYVDLKKEAMKDLEAGPDYSVEMTNATNVEPNLALFLEGAETVKTEMASI 331
           MNDLMTKSF+SYVDLKKEAMKDLEAGP+Y ++M + T ++ NL LFLE AE VK EM  I
Sbjct: 1   MNDLMTKSFISYVDLKKEAMKDLEAGPEYDLQM-SGTQMDRNLGLFLEEAEKVKQEMGLI 59

Query: 332 RDILGRLQDA 361
           R+ILGRL +A
Sbjct: 60  REILGRLHEA 69