BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035606
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304134.1| GRAS family transcription factor [Populus tr...   124   1e-26
emb|CBI35869.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_002273108.1| PREDICTED: nodulation-signaling pathway 1 pr...   122   4e-26
ref|XP_003627294.1| Nodulation signaling pathway 1 protein [Medi...   120   9e-26
emb|CAJ00013.1| Nodulation Signaling Pathway 1-2 protein [Medica...   120   9e-26

>ref|XP_002304134.1| GRAS family transcription factor [Populus trichocarpa]
           gi|66947642|emb|CAJ00015.1| Nodulation Signaling Pathway
           1 protein homologue 2 [Populus trichocarpa]
           gi|222841566|gb|EEE79113.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 562

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/93 (62%), Positives = 68/93 (73%)
 Frame = -1

Query: 279 LNPCAVAISNGNLTRVQHLLYVLHELASPSGDANHRLAAHGLRAXXXXXXXXXXXXXXXX 100
           LNPCA AI+ GNL+RVQHLLYVLHELASP+GDANHRLAAHGLRA                
Sbjct: 178 LNPCAAAITIGNLSRVQHLLYVLHELASPTGDANHRLAAHGLRALTHHLSSSSTVSSASI 237

Query: 99  LPITFTSTDPRLFQRSLLKFCEISPWFTFPNTV 1
             +TF ST+P+ FQ++LLKF E+SPWF FPN +
Sbjct: 238 GTVTFASTEPKFFQKALLKFYEVSPWFAFPNNI 270


>emb|CBI35869.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  122 bits (305), Expect = 4e-26
 Identities = 61/93 (65%), Positives = 68/93 (73%)
 Frame = -1

Query: 279 LNPCAVAISNGNLTRVQHLLYVLHELASPSGDANHRLAAHGLRAXXXXXXXXXXXXXXXX 100
           LNPCA AI+ GNL+RVQHLLYVLHELAS +GDANHRLA HGLRA                
Sbjct: 124 LNPCATAITAGNLSRVQHLLYVLHELASSTGDANHRLADHGLRA-----LSHHLSSSVSV 178

Query: 99  LPITFTSTDPRLFQRSLLKFCEISPWFTFPNTV 1
            PITF+ST+PR FQRSLLKF E+SPWF FPN +
Sbjct: 179 GPITFSSTEPRFFQRSLLKFYEVSPWFAFPNNI 211


>ref|XP_002273108.1| PREDICTED: nodulation-signaling pathway 1 protein [Vitis vinifera]
          Length = 545

 Score =  122 bits (305), Expect = 4e-26
 Identities = 61/93 (65%), Positives = 68/93 (73%)
 Frame = -1

Query: 279 LNPCAVAISNGNLTRVQHLLYVLHELASPSGDANHRLAAHGLRAXXXXXXXXXXXXXXXX 100
           LNPCA AI+ GNL+RVQHLLYVLHELAS +GDANHRLA HGLRA                
Sbjct: 165 LNPCATAITAGNLSRVQHLLYVLHELASSTGDANHRLADHGLRA-----LSHHLSSSVSV 219

Query: 99  LPITFTSTDPRLFQRSLLKFCEISPWFTFPNTV 1
            PITF+ST+PR FQRSLLKF E+SPWF FPN +
Sbjct: 220 GPITFSSTEPRFFQRSLLKFYEVSPWFAFPNNI 252


>ref|XP_003627294.1| Nodulation signaling pathway 1 protein [Medicago truncatula]
           gi|71648721|sp|Q4VYC8.1|NSP1_MEDTR RecName:
           Full=Nodulation-signaling pathway 1 protein
           gi|66947619|emb|CAJ00005.1| Nodulation Signaling Pathway
           1 protein [Medicago truncatula]
           gi|66947628|emb|CAJ00010.1| Nodulation Signaling Pathway
           1 protein [Medicago truncatula]
           gi|355521316|gb|AET01770.1| Nodulation signaling pathway
           1 protein [Medicago truncatula]
           gi|357394653|gb|AET75782.1| NSP1 [Cloning vector
           pHUGE-MtNFS] gi|357394666|gb|AET75794.1| NSP1 [Cloning
           vector pHUGE-LjMtNFS]
          Length = 554

 Score =  120 bits (302), Expect = 9e-26
 Identities = 61/93 (65%), Positives = 67/93 (72%)
 Frame = -1

Query: 279 LNPCAVAISNGNLTRVQHLLYVLHELASPSGDANHRLAAHGLRAXXXXXXXXXXXXXXXX 100
           LNPCAVAI+ GNL RVQHLLYVLHELAS +GDANHRLAAHGLRA                
Sbjct: 172 LNPCAVAITGGNLNRVQHLLYVLHELASTTGDANHRLAAHGLRA--LTHHLSSSSSSTPS 229

Query: 99  LPITFTSTDPRLFQRSLLKFCEISPWFTFPNTV 1
             ITF ST+PR FQ+SLLKF E SPWF+FPN +
Sbjct: 230 GTITFASTEPRFFQKSLLKFYEFSPWFSFPNNI 262


>emb|CAJ00013.1| Nodulation Signaling Pathway 1-2 protein [Medicago truncatula]
          Length = 487

 Score =  120 bits (302), Expect = 9e-26
 Identities = 61/93 (65%), Positives = 67/93 (72%)
 Frame = -1

Query: 279 LNPCAVAISNGNLTRVQHLLYVLHELASPSGDANHRLAAHGLRAXXXXXXXXXXXXXXXX 100
           LNPCAVAI+ GNL RVQHLLYVLHELAS +GDANHRLAAHGLRA                
Sbjct: 172 LNPCAVAITGGNLNRVQHLLYVLHELASTTGDANHRLAAHGLRA--LTHHLSSSSSSTPS 229

Query: 99  LPITFTSTDPRLFQRSLLKFCEISPWFTFPNTV 1
             ITF ST+PR FQ+SLLKF E SPWF+FPN +
Sbjct: 230 GTITFASTEPRFFQKSLLKFYEFSPWFSFPNNI 262