BLASTX nr result

ID: Coptis24_contig00035603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035603
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285930.1| PREDICTED: uncharacterized protein LOC100262...   149   2e-34
ref|XP_002307778.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002510655.1| conserved hypothetical protein [Ricinus comm...   141   6e-32
ref|XP_003523532.1| PREDICTED: uncharacterized protein LOC100814...   140   1e-31
ref|XP_003527643.1| PREDICTED: uncharacterized protein LOC100786...   137   7e-31

>ref|XP_002285930.1| PREDICTED: uncharacterized protein LOC100262535 [Vitis vinifera]
           gi|302141669|emb|CBI18872.3| unnamed protein product
           [Vitis vinifera]
          Length = 434

 Score =  149 bits (376), Expect = 2e-34
 Identities = 63/107 (58%), Positives = 81/107 (75%)
 Frame = -3

Query: 405 PLSGAKCRPCKPVCVGTCVANVMSNVNKGHEWPNWEKGSTQLCDAQGDWETGWEKIFDQA 226
           PLSGAKCRPC+PVC G CVA+V+ ++ KG  W +W  GS QLCDA G+WE GWEK FD+ 
Sbjct: 328 PLSGAKCRPCEPVCQGPCVADVIGSLIKGWSWTDWANGSLQLCDAHGEWEKGWEKRFDRV 387

Query: 225 AGKKFATVRKHMKALSLRECIANFEEMKRRTNNWYSPSVIEICRLGL 85
           AG K A  RK + AL L++C+ +FEEM+ RT+NW +P+  EIC+LGL
Sbjct: 388 AGSKLARARKRVGALRLKDCVKDFEEMRNRTSNWDAPTASEICKLGL 434


>ref|XP_002307778.1| predicted protein [Populus trichocarpa] gi|222857227|gb|EEE94774.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  146 bits (368), Expect = 2e-33
 Identities = 63/107 (58%), Positives = 81/107 (75%)
 Frame = -3

Query: 405 PLSGAKCRPCKPVCVGTCVANVMSNVNKGHEWPNWEKGSTQLCDAQGDWETGWEKIFDQA 226
           PLSGAKCRPCKPVC GTCV ++M+ + K   W NWE G+ +LCDA GD E GWEKIFD+ 
Sbjct: 330 PLSGAKCRPCKPVCEGTCVGDIMTWLYKDWSWTNWENGTLKLCDAHGDLEAGWEKIFDRD 389

Query: 225 AGKKFATVRKHMKALSLRECIANFEEMKRRTNNWYSPSVIEICRLGL 85
           AGK+FA+ RK ++ L+ ++C  +F EMK+R + W +P V EICRLGL
Sbjct: 390 AGKEFASERKRIRGLNTKQCAVDFNEMKKRASMWDTPPVEEICRLGL 436


>ref|XP_002510655.1| conserved hypothetical protein [Ricinus communis]
           gi|223551356|gb|EEF52842.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 421

 Score =  141 bits (355), Expect = 6e-32
 Identities = 60/110 (54%), Positives = 77/110 (70%)
 Frame = -3

Query: 405 PLSGAKCRPCKPVCVGTCVANVMSNVNKGHEWPNWEKGSTQLCDAQGDWETGWEKIFDQA 226
           PLSGAKCRPC PVC G+CV  +M  ++KG  W NWE G+ QLCDA  DWE GWE +FD+ 
Sbjct: 311 PLSGAKCRPCTPVCKGSCVGVIMQWLDKGWSWTNWENGTLQLCDAHEDWENGWEILFDKV 370

Query: 225 AGKKFATVRKHMKALSLRECIANFEEMKRRTNNWYSPSVIEICRLGLDPK 76
           AGK+ A  RK +  L L++C+ +F +MKRR   W SP V ++CRLG+  K
Sbjct: 371 AGKQRAAARKRVWGLKLKQCVDDFSDMKRRAGKWDSPPVEDMCRLGVGEK 420


>ref|XP_003523532.1| PREDICTED: uncharacterized protein LOC100814333 [Glycine max]
          Length = 426

 Score =  140 bits (353), Expect = 1e-31
 Identities = 58/109 (53%), Positives = 77/109 (70%)
 Frame = -3

Query: 405 PLSGAKCRPCKPVCVGTCVANVMSNVNKGHEWPNWEKGSTQLCDAQGDWETGWEKIFDQA 226
           PLSGAKCRPC+P C G CV  VM NV K   W +WE G+ QLCDA   WE+GWEKIFD+ 
Sbjct: 317 PLSGAKCRPCRPACEGLCVETVMDNVEKEWSWTHWENGALQLCDAHDAWESGWEKIFDRF 376

Query: 225 AGKKFATVRKHMKALSLRECIANFEEMKRRTNNWYSPSVIEICRLGLDP 79
           +G KFA  RK + ++ + EC+ +F ++++R+ +W +P V EIC LGL P
Sbjct: 377 SGNKFAAARKRIHSMRMGECVKDFVQLRKRSAHWSAPPVDEICTLGLSP 425


>ref|XP_003527643.1| PREDICTED: uncharacterized protein LOC100786713 [Glycine max]
          Length = 426

 Score =  137 bits (346), Expect = 7e-31
 Identities = 57/109 (52%), Positives = 78/109 (71%)
 Frame = -3

Query: 405 PLSGAKCRPCKPVCVGTCVANVMSNVNKGHEWPNWEKGSTQLCDAQGDWETGWEKIFDQA 226
           PLSGAKCRPC+ VC G C   VM +V K   W +WE G+ QLCDA   WE+GWEK FD+ 
Sbjct: 317 PLSGAKCRPCREVCEGLCAETVMDSVEKVWSWTHWENGALQLCDAHDAWESGWEKNFDRL 376

Query: 225 AGKKFATVRKHMKALSLRECIANFEEMKRRTNNWYSPSVIEICRLGLDP 79
           AGKKFA  RK ++++ + EC+ +F ++++R+ +W +P V EIC LGL+P
Sbjct: 377 AGKKFAAARKRIQSMKMEECVKDFVQLRKRSAHWSAPLVDEICALGLNP 425


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