BLASTX nr result

ID: Coptis24_contig00035593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035593
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171767.1| PREDICTED: uncharacterized protein LOC101226...    74   9e-12
ref|XP_004149868.1| PREDICTED: transmembrane protein 53-like [Cu...    74   9e-12
ref|XP_002306371.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002276066.1| PREDICTED: transmembrane protein 53 [Vitis v...    72   4e-11
ref|XP_002513121.1| conserved hypothetical protein [Ricinus comm...    72   6e-11

>ref|XP_004171767.1| PREDICTED: uncharacterized protein LOC101226632, partial [Cucumis
           sativus]
          Length = 234

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 45/90 (50%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
 Frame = -1

Query: 255 SSSLSTKGNSLVSPIASHPCLLALHRSAAGFNDSRHFKPLP-----PPEVMYKWHLPEAN 91
           SSS +  GN   S ++S   L  L++SAA    S+   P P     P EVMY+WHLPE  
Sbjct: 94  SSSCNYVGNFPTSLVSSS-VLSNLYQSAALTKGSKQAAPSPKLSSPPSEVMYRWHLPEPT 152

Query: 90  LRKVSDDSDCLLAKSRTVVVLLGWLGAKQK 1
              ++  S C +AKSRTVVVLLGWLGAKQK
Sbjct: 153 SLDITGSSACSVAKSRTVVVLLGWLGAKQK 182


>ref|XP_004149868.1| PREDICTED: transmembrane protein 53-like [Cucumis sativus]
          Length = 442

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 45/90 (50%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
 Frame = -1

Query: 255 SSSLSTKGNSLVSPIASHPCLLALHRSAAGFNDSRHFKPLP-----PPEVMYKWHLPEAN 91
           SSS +  GN   S ++S   L  L++SAA    S+   P P     P EVMY+WHLPE  
Sbjct: 90  SSSCNYVGNFPTSLVSSS-VLSNLYQSAALTKGSKQAAPSPKLSSPPSEVMYRWHLPEPT 148

Query: 90  LRKVSDDSDCLLAKSRTVVVLLGWLGAKQK 1
              ++  S C +AKSRTVVVLLGWLGAKQK
Sbjct: 149 SLDITGSSACSVAKSRTVVVLLGWLGAKQK 178


>ref|XP_002306371.1| predicted protein [Populus trichocarpa] gi|222855820|gb|EEE93367.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/77 (51%), Positives = 51/77 (66%), Gaps = 6/77 (7%)
 Frame = -1

Query: 213 IASHPCLLALHRSA--AGFNDSRHFK----PLPPPEVMYKWHLPEANLRKVSDDSDCLLA 52
           +AS P L++L++SA  A       FK    P   P+++Y+WHLPE +   VS  SDCL  
Sbjct: 106 VASSPLLVSLYQSAELAKGPKPSAFKTTNIPTSSPDILYRWHLPEPSTIDVSGSSDCLSE 165

Query: 51  KSRTVVVLLGWLGAKQK 1
           KSRTVVVLLGWLG+KQK
Sbjct: 166 KSRTVVVLLGWLGSKQK 182


>ref|XP_002276066.1| PREDICTED: transmembrane protein 53 [Vitis vinifera]
          Length = 442

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/82 (47%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
 Frame = -1

Query: 231 NSLVSPIASHPCLLALHRSAAGFNDSR-----HFKPLPPPEVMYKWHLPEANLRKVSDDS 67
           N L S + S P L+ L++SA      +     H  P    +V+Y+WHLP+ N   V +DS
Sbjct: 98  NLLSSSVVSSPTLINLYQSAELAKAPKPTTFKHSIPALASDVLYRWHLPDPNACDVLEDS 157

Query: 66  DCLLAKSRTVVVLLGWLGAKQK 1
           DC   KSRTVVVLLGWLGA+QK
Sbjct: 158 DCSSVKSRTVVVLLGWLGARQK 179


>ref|XP_002513121.1| conserved hypothetical protein [Ricinus communis]
           gi|223548132|gb|EEF49624.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 440

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/47 (68%), Positives = 37/47 (78%)
 Frame = -1

Query: 141 PLPPPEVMYKWHLPEANLRKVSDDSDCLLAKSRTVVVLLGWLGAKQK 1
           P  PP+V+Y+WHLPE +   VS  SDC  AKSRTVVVLLGWLG+KQK
Sbjct: 132 PTSPPDVLYRWHLPEPDAIDVSGSSDCSSAKSRTVVVLLGWLGSKQK 178


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