BLASTX nr result
ID: Coptis24_contig00035583
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035583 (341 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002319481.1| predicted protein [Populus trichocarpa] gi|2... 83 2e-14 gb|ABK94876.1| unknown [Populus trichocarpa] 83 2e-14 ref|XP_002277564.1| PREDICTED: NHL repeat-containing protein 2-l... 77 2e-12 emb|CAN61591.1| hypothetical protein VITISV_030553 [Vitis vinifera] 77 2e-12 gb|EEC73215.1| hypothetical protein OsI_07299 [Oryza sativa Indi... 72 5e-11 >ref|XP_002319481.1| predicted protein [Populus trichocarpa] gi|222857857|gb|EEE95404.1| predicted protein [Populus trichocarpa] Length = 1065 Score = 83.2 bits (204), Expect = 2e-14 Identities = 53/119 (44%), Positives = 69/119 (57%), Gaps = 6/119 (5%) Frame = +2 Query: 2 EKMAFPLFAPSSTTKLSSPYYPQSFKQFRPTIFFSLLQRRKQTQPQTPFSSRQNRNTI-- 175 + MA L +P S+ LSSP + +S F S + K R+++N + Sbjct: 4 QAMAMKLLSPPSS--LSSPRFAKSL-----FFFTSNPKGSKPISSLVQLFQRRSKNLVFN 56 Query: 176 ----ITCCLKLENSNAIETEEEKNTWGKVSAVLFDMDGVLCDSEESSRLAGVDVFAEMG 340 + C+K+E + ETE N WGKVSAVLFDMDGVLC+SEE SR+AGVDVFAEMG Sbjct: 57 KKMEVKACVKVEQKS--ETEVTGNEWGKVSAVLFDMDGVLCNSEEPSRMAGVDVFAEMG 113 >gb|ABK94876.1| unknown [Populus trichocarpa] Length = 308 Score = 83.2 bits (204), Expect = 2e-14 Identities = 53/119 (44%), Positives = 69/119 (57%), Gaps = 6/119 (5%) Frame = +2 Query: 2 EKMAFPLFAPSSTTKLSSPYYPQSFKQFRPTIFFSLLQRRKQTQPQTPFSSRQNRNTI-- 175 + MA L +P S+ LSSP + +S F S + K R+++N + Sbjct: 4 QAMAMKLLSPPSS--LSSPRFAKSL-----FFFTSNPKGSKPISSLVQLFQRRSKNLVFN 56 Query: 176 ----ITCCLKLENSNAIETEEEKNTWGKVSAVLFDMDGVLCDSEESSRLAGVDVFAEMG 340 + C+K+E + ETE N WGKVSAVLFDMDGVLC+SEE SR+AGVDVFAEMG Sbjct: 57 KKMEVKACVKVEQKS--ETEVTGNEWGKVSAVLFDMDGVLCNSEEPSRMAGVDVFAEMG 113 >ref|XP_002277564.1| PREDICTED: NHL repeat-containing protein 2-like [Vitis vinifera] Length = 1078 Score = 76.6 bits (187), Expect = 2e-12 Identities = 41/64 (64%), Positives = 44/64 (68%) Frame = +2 Query: 149 SSRQNRNTIITCCLKLENSNAIETEEEKNTWGKVSAVLFDMDGVLCDSEESSRLAGVDVF 328 S R R C+KLE N ET K+ WGKVSAVLFDMDGVLC+SEE SR AGVDVF Sbjct: 39 SLRHRRTAAPKACVKLEEKNVPETG--KSQWGKVSAVLFDMDGVLCNSEEPSRRAGVDVF 96 Query: 329 AEMG 340 EMG Sbjct: 97 HEMG 100 >emb|CAN61591.1| hypothetical protein VITISV_030553 [Vitis vinifera] Length = 659 Score = 76.6 bits (187), Expect = 2e-12 Identities = 41/64 (64%), Positives = 44/64 (68%) Frame = +2 Query: 149 SSRQNRNTIITCCLKLENSNAIETEEEKNTWGKVSAVLFDMDGVLCDSEESSRLAGVDVF 328 S R R C+KLE N ET K+ WGKVSAVLFDMDGVLC+SEE SR AGVDVF Sbjct: 39 SLRHRRTAAPKACVKLEEKNVPETG--KSQWGKVSAVLFDMDGVLCNSEEPSRRAGVDVF 96 Query: 329 AEMG 340 EMG Sbjct: 97 HEMG 100 >gb|EEC73215.1| hypothetical protein OsI_07299 [Oryza sativa Indica Group] Length = 1103 Score = 72.0 bits (175), Expect = 5e-11 Identities = 35/46 (76%), Positives = 39/46 (84%) Frame = +2 Query: 203 SNAIETEEEKNTWGKVSAVLFDMDGVLCDSEESSRLAGVDVFAEMG 340 S++ ETE WGKVSAVLFDMDGVLC+SEE SRLAGVD+FAEMG Sbjct: 65 SSSPETEVAPGAWGKVSAVLFDMDGVLCNSEELSRLAGVDLFAEMG 110