BLASTX nr result

ID: Coptis24_contig00035583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035583
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319481.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
gb|ABK94876.1| unknown [Populus trichocarpa]                           83   2e-14
ref|XP_002277564.1| PREDICTED: NHL repeat-containing protein 2-l...    77   2e-12
emb|CAN61591.1| hypothetical protein VITISV_030553 [Vitis vinifera]    77   2e-12
gb|EEC73215.1| hypothetical protein OsI_07299 [Oryza sativa Indi...    72   5e-11

>ref|XP_002319481.1| predicted protein [Populus trichocarpa] gi|222857857|gb|EEE95404.1|
           predicted protein [Populus trichocarpa]
          Length = 1065

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 53/119 (44%), Positives = 69/119 (57%), Gaps = 6/119 (5%)
 Frame = +2

Query: 2   EKMAFPLFAPSSTTKLSSPYYPQSFKQFRPTIFFSLLQRRKQTQPQTPFSSRQNRNTI-- 175
           + MA  L +P S+  LSSP + +S        F S  +  K          R+++N +  
Sbjct: 4   QAMAMKLLSPPSS--LSSPRFAKSL-----FFFTSNPKGSKPISSLVQLFQRRSKNLVFN 56

Query: 176 ----ITCCLKLENSNAIETEEEKNTWGKVSAVLFDMDGVLCDSEESSRLAGVDVFAEMG 340
               +  C+K+E  +  ETE   N WGKVSAVLFDMDGVLC+SEE SR+AGVDVFAEMG
Sbjct: 57  KKMEVKACVKVEQKS--ETEVTGNEWGKVSAVLFDMDGVLCNSEEPSRMAGVDVFAEMG 113


>gb|ABK94876.1| unknown [Populus trichocarpa]
          Length = 308

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 53/119 (44%), Positives = 69/119 (57%), Gaps = 6/119 (5%)
 Frame = +2

Query: 2   EKMAFPLFAPSSTTKLSSPYYPQSFKQFRPTIFFSLLQRRKQTQPQTPFSSRQNRNTI-- 175
           + MA  L +P S+  LSSP + +S        F S  +  K          R+++N +  
Sbjct: 4   QAMAMKLLSPPSS--LSSPRFAKSL-----FFFTSNPKGSKPISSLVQLFQRRSKNLVFN 56

Query: 176 ----ITCCLKLENSNAIETEEEKNTWGKVSAVLFDMDGVLCDSEESSRLAGVDVFAEMG 340
               +  C+K+E  +  ETE   N WGKVSAVLFDMDGVLC+SEE SR+AGVDVFAEMG
Sbjct: 57  KKMEVKACVKVEQKS--ETEVTGNEWGKVSAVLFDMDGVLCNSEEPSRMAGVDVFAEMG 113


>ref|XP_002277564.1| PREDICTED: NHL repeat-containing protein 2-like [Vitis vinifera]
          Length = 1078

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/64 (64%), Positives = 44/64 (68%)
 Frame = +2

Query: 149 SSRQNRNTIITCCLKLENSNAIETEEEKNTWGKVSAVLFDMDGVLCDSEESSRLAGVDVF 328
           S R  R      C+KLE  N  ET   K+ WGKVSAVLFDMDGVLC+SEE SR AGVDVF
Sbjct: 39  SLRHRRTAAPKACVKLEEKNVPETG--KSQWGKVSAVLFDMDGVLCNSEEPSRRAGVDVF 96

Query: 329 AEMG 340
            EMG
Sbjct: 97  HEMG 100


>emb|CAN61591.1| hypothetical protein VITISV_030553 [Vitis vinifera]
          Length = 659

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/64 (64%), Positives = 44/64 (68%)
 Frame = +2

Query: 149 SSRQNRNTIITCCLKLENSNAIETEEEKNTWGKVSAVLFDMDGVLCDSEESSRLAGVDVF 328
           S R  R      C+KLE  N  ET   K+ WGKVSAVLFDMDGVLC+SEE SR AGVDVF
Sbjct: 39  SLRHRRTAAPKACVKLEEKNVPETG--KSQWGKVSAVLFDMDGVLCNSEEPSRRAGVDVF 96

Query: 329 AEMG 340
            EMG
Sbjct: 97  HEMG 100


>gb|EEC73215.1| hypothetical protein OsI_07299 [Oryza sativa Indica Group]
          Length = 1103

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/46 (76%), Positives = 39/46 (84%)
 Frame = +2

Query: 203 SNAIETEEEKNTWGKVSAVLFDMDGVLCDSEESSRLAGVDVFAEMG 340
           S++ ETE     WGKVSAVLFDMDGVLC+SEE SRLAGVD+FAEMG
Sbjct: 65  SSSPETEVAPGAWGKVSAVLFDMDGVLCNSEELSRLAGVDLFAEMG 110


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