BLASTX nr result

ID: Coptis24_contig00035580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035580
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318063.1| predicted protein [Populus trichocarpa] gi|2...   210   8e-53
ref|XP_002511340.1| Disease resistance protein RPP13, putative [...   207   5e-52
ref|XP_002278135.1| PREDICTED: putative disease resistance prote...   204   5e-51
emb|CAN62186.1| hypothetical protein VITISV_003708 [Vitis vinifera]   204   6e-51
ref|XP_003635114.1| PREDICTED: putative disease resistance prote...   188   4e-46

>ref|XP_002318063.1| predicted protein [Populus trichocarpa] gi|222858736|gb|EEE96283.1|
           predicted protein [Populus trichocarpa]
          Length = 583

 Score =  210 bits (535), Expect = 8e-53
 Identities = 99/131 (75%), Positives = 111/131 (84%)
 Frame = -3

Query: 393 WFSLMGNLIKLRLGFSHLSEDPALVLQFLPNLKHLTLWRAYDGKQIGKEFCGVGGFPKLE 214
           W   M +L KLRLGFSHLSE+P LVLQ LPNL+ LTLW AYDG+Q+GK+FC  GGFPKLE
Sbjct: 417 WLGSMESLTKLRLGFSHLSENPTLVLQVLPNLEKLTLWHAYDGRQLGKDFCKPGGFPKLE 476

Query: 213 VLVIASHVLEEWTELEEGALPNLKYLHMHNCLRLRTLPEGLQHITTLQELKLIPLLDDHV 34
           VL+IAS VLEEWTELEEGALP LKYLH HNCL LR LPEGLQ +TT++EL L+PLLD+H 
Sbjct: 477 VLIIASRVLEEWTELEEGALPRLKYLHFHNCLNLRMLPEGLQFVTTVEELVLLPLLDEHE 536

Query: 33  ERLKPDGGEEN 1
           ERLKPDGG EN
Sbjct: 537 ERLKPDGGLEN 547


>ref|XP_002511340.1| Disease resistance protein RPP13, putative [Ricinus communis]
           gi|223550455|gb|EEF51942.1| Disease resistance protein
           RPP13, putative [Ricinus communis]
          Length = 685

 Score =  207 bits (528), Expect = 5e-52
 Identities = 100/131 (76%), Positives = 110/131 (83%)
 Frame = -3

Query: 393 WFSLMGNLIKLRLGFSHLSEDPALVLQFLPNLKHLTLWRAYDGKQIGKEFCGVGGFPKLE 214
           W   M  L KLRLGFSHLSE P LVLQ LPNLK LTLW AYD KQ+GKEFC  GGFPKLE
Sbjct: 522 WLGSMEKLTKLRLGFSHLSEIPMLVLQILPNLKILTLWHAYDTKQLGKEFCKAGGFPKLE 581

Query: 213 VLVIASHVLEEWTELEEGALPNLKYLHMHNCLRLRTLPEGLQHITTLQELKLIPLLDDHV 34
           VL IAS+VLEEWTELEEGALP+L+ LH HNC  LR LPEGLQ++TTL++LKL+PLLD+H 
Sbjct: 582 VLRIASYVLEEWTELEEGALPSLQCLHFHNCSSLRILPEGLQYVTTLKQLKLLPLLDEHA 641

Query: 33  ERLKPDGGEEN 1
           ERLKPDGGEEN
Sbjct: 642 ERLKPDGGEEN 652


>ref|XP_002278135.1| PREDICTED: putative disease resistance protein At1g58400-like
           [Vitis vinifera]
          Length = 653

 Score =  204 bits (520), Expect = 5e-51
 Identities = 97/131 (74%), Positives = 110/131 (83%)
 Frame = -3

Query: 393 WFSLMGNLIKLRLGFSHLSEDPALVLQFLPNLKHLTLWRAYDGKQIGKEFCGVGGFPKLE 214
           W  LM  L  LRLG+SHLSE+P  VLQ LPNLK LTLW+A++ K IGKEFC  GGFPKLE
Sbjct: 494 WLGLMERLTYLRLGYSHLSENPTSVLQLLPNLKILTLWQAFEAKHIGKEFCRAGGFPKLE 553

Query: 213 VLVIASHVLEEWTELEEGALPNLKYLHMHNCLRLRTLPEGLQHITTLQELKLIPLLDDHV 34
            L IASHVLEEWTELEEGA+P+LK+L + NCLRLRTLPEGLQ ITTL++L L+PLLDDH 
Sbjct: 554 DLTIASHVLEEWTELEEGAIPSLKFLRLRNCLRLRTLPEGLQFITTLKQLSLLPLLDDHE 613

Query: 33  ERLKPDGGEEN 1
           ERL+PDGGEEN
Sbjct: 614 ERLRPDGGEEN 624


>emb|CAN62186.1| hypothetical protein VITISV_003708 [Vitis vinifera]
          Length = 653

 Score =  204 bits (519), Expect = 6e-51
 Identities = 97/131 (74%), Positives = 110/131 (83%)
 Frame = -3

Query: 393 WFSLMGNLIKLRLGFSHLSEDPALVLQFLPNLKHLTLWRAYDGKQIGKEFCGVGGFPKLE 214
           W  LM  L  LRLG+SHLSE+P  VLQ LPNLK LTLW+A++ K IGKEFC  GGFPKLE
Sbjct: 494 WLGLMERLTYLRLGYSHLSENPTSVLQLLPNLKILTLWQAFEAKHIGKEFCRAGGFPKLE 553

Query: 213 VLVIASHVLEEWTELEEGALPNLKYLHMHNCLRLRTLPEGLQHITTLQELKLIPLLDDHV 34
            L IASHVLEEWTELEEGA+P+LK+L + NCLRLRTLPEGLQ ITTL++L L+PLLDDH 
Sbjct: 554 DLTIASHVLEEWTELEEGAIPSLKFLXLRNCLRLRTLPEGLQFITTLKQLSLLPLLDDHE 613

Query: 33  ERLKPDGGEEN 1
           ERL+PDGGEEN
Sbjct: 614 ERLRPDGGEEN 624


>ref|XP_003635114.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 466

 Score =  188 bits (477), Expect = 4e-46
 Identities = 92/131 (70%), Positives = 104/131 (79%)
 Frame = -3

Query: 393 WFSLMGNLIKLRLGFSHLSEDPALVLQFLPNLKHLTLWRAYDGKQIGKEFCGVGGFPKLE 214
           W S   NL KLRLGFSHL E+P  VLQFLPNLK LTLW+AY+ KQIGKEFC VGGFPKLE
Sbjct: 323 WLSSTENLTKLRLGFSHLFENPNAVLQFLPNLKQLTLWQAYNAKQIGKEFCPVGGFPKLE 382

Query: 213 VLVIASHVLEEWTELEEGALPNLKYLHMHNCLRLRTLPEGLQHITTLQELKLIPLLDDHV 34
           VLVIAS+ L EWTE+E+GALP+LKYLH H C RL  LPEGLQ++TTLQ+L L PL  DH 
Sbjct: 383 VLVIASNNLVEWTEIEKGALPSLKYLHFHCCSRLMILPEGLQYVTTLQKLSLFPLHGDHA 442

Query: 33  ERLKPDGGEEN 1
            RL P+ G E+
Sbjct: 443 RRLDPERGIEH 453


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