BLASTX nr result

ID: Coptis24_contig00035568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035568
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77775.1| hypothetical protein VITISV_021887 [Vitis vinifera]    57   4e-14
emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]    57   1e-13
emb|CBI31290.3| unnamed protein product [Vitis vinifera]               57   1e-13
emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]    57   2e-13
ref|XP_002329064.1| predicted protein [Populus trichocarpa] gi|2...    51   6e-13

>emb|CAN77775.1| hypothetical protein VITISV_021887 [Vitis vinifera]
          Length = 735

 Score = 57.0 bits (136), Expect(2) = 4e-14
 Identities = 30/78 (38%), Positives = 48/78 (61%)
 Frame = -3

Query: 434 DKKLMIWIHATLFE*ILPCVIGSKTSSELWLSLEKRLAHFKLTHQVQLRQDLQNQSKGTL 255
           D+ L+ WI A++FE +   V+  +TS+E+W  LEK          +QLR  LQ+  KG L
Sbjct: 85  DQFLLSWILASIFEAMYGHVVNCQTSTEVWSVLEKLFVSDSKARTLQLRFMLQSLKKGAL 144

Query: 254 STAEYLQRIRHLRDMLAT 201
           S  +Y+ ++R++ DML+T
Sbjct: 145 SINDYVLKMRNIADMLST 162



 Score = 45.4 bits (106), Expect(2) = 4e-14
 Identities = 22/57 (38%), Positives = 36/57 (63%)
 Frame = -2

Query: 201 LAAAGTPVHDSDLLVYILKGLPAEYGPFATSVRVRANSISMDDLYNLLLSEEIAIEQ 31
           L+ +G PV   DL++YIL GL  E+     ++  R+ +IS+ +++ LL S EI +EQ
Sbjct: 160 LSTSGKPVPYEDLILYILGGLGPEFETIVVNITSRSEAISLQEVHYLLQSHEIRLEQ 216


>emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]
          Length = 1312

 Score = 57.0 bits (136), Expect(2) = 1e-13
 Identities = 24/77 (31%), Positives = 47/77 (61%)
 Frame = -3

Query: 434 DKKLMIWIHATLFE*ILPCVIGSKTSSELWLSLEKRLAHFKLTHQVQLRQDLQNQSKGTL 255
           D+ ++ WI+++L   ++  ++G +TS E W +L++  +       +QLR   Q   KG+L
Sbjct: 85  DRMILSWIYSSLTPEVMGQIVGLQTSHEAWTALQRSFSASTKARTMQLRLAFQTTKKGSL 144

Query: 254 STAEYLQRIRHLRDMLA 204
           +  EY+Q+++H+ D LA
Sbjct: 145 TMMEYIQKLKHISDSLA 161



 Score = 43.9 bits (102), Expect(2) = 1e-13
 Identities = 20/53 (37%), Positives = 33/53 (62%)
 Frame = -2

Query: 204 NLAAAGTPVHDSDLLVYILKGLPAEYGPFATSVRVRANSISMDDLYNLLLSEE 46
           +LAA G PV + D ++ +L GL AEY P   S+  R + I +  ++++LL+ E
Sbjct: 159 SLAAIGEPVPEKDQILQLLSGLGAEYNPIVASLTARDDDIQLHAVHSILLTHE 211


>emb|CBI31290.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score = 57.4 bits (137), Expect(2) = 1e-13
 Identities = 24/77 (31%), Positives = 47/77 (61%)
 Frame = -3

Query: 434 DKKLMIWIHATLFE*ILPCVIGSKTSSELWLSLEKRLAHFKLTHQVQLRQDLQNQSKGTL 255
           D+ ++ WI+++L   ++  ++G +TS E W +L++  +       +QLR   Q   KG+L
Sbjct: 185 DRMILSWIYSSLTPDVMGQIVGLQTSHEAWTALQRSFSASTKARTMQLRLAFQTNKKGSL 244

Query: 254 STAEYLQRIRHLRDMLA 204
           +  EY+Q+++H+ D LA
Sbjct: 245 TMMEYIQKLKHISDSLA 261



 Score = 43.5 bits (101), Expect(2) = 1e-13
 Identities = 20/53 (37%), Positives = 33/53 (62%)
 Frame = -2

Query: 204 NLAAAGTPVHDSDLLVYILKGLPAEYGPFATSVRVRANSISMDDLYNLLLSEE 46
           +LAA G PV + D ++ +L GL AEY P   S+  R + I +  ++++LL+ E
Sbjct: 259 SLAAIGEPVPEKDQILQLLSGLGAEYNPIIASLTTRDDDIQLHAVHSILLTHE 311


>emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
          Length = 1074

 Score = 56.6 bits (135), Expect(2) = 2e-13
 Identities = 24/77 (31%), Positives = 47/77 (61%)
 Frame = -3

Query: 434 DKKLMIWIHATLFE*ILPCVIGSKTSSELWLSLEKRLAHFKLTHQVQLRQDLQNQSKGTL 255
           D+ ++ WI+++L   ++  ++G +TS E W +L++  +       +QLR   Q   KG+L
Sbjct: 41  DRMILSWIYSSLTPDVMRQIVGLQTSHEAWTALQQSFSASTKARTMQLRLAFQTTKKGSL 100

Query: 254 STAEYLQRIRHLRDMLA 204
           +  EY+Q+++H+ D LA
Sbjct: 101 TMMEYIQKLKHISDSLA 117



 Score = 43.9 bits (102), Expect(2) = 2e-13
 Identities = 20/53 (37%), Positives = 33/53 (62%)
 Frame = -2

Query: 204 NLAAAGTPVHDSDLLVYILKGLPAEYGPFATSVRVRANSISMDDLYNLLLSEE 46
           +LAA G PV + D ++ +L GL AEY P   S+  R + I +  ++++LL+ E
Sbjct: 115 SLAAIGEPVPEKDQILQLLSGLGAEYNPIVASLTARDDDIQLHAVHSILLTHE 167


>ref|XP_002329064.1| predicted protein [Populus trichocarpa] gi|222839735|gb|EEE78058.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score = 51.2 bits (121), Expect(2) = 6e-13
 Identities = 25/65 (38%), Positives = 41/65 (63%)
 Frame = -2

Query: 201 LAAAGTPVHDSDLLVYILKGLPAEYGPFATSVRVRANSISMDDLYNLLLSEEIAIEQAQR 22
           LA AG P+ + D++ YIL GL  EY   A+++  R + +S+++L++LLL  E  I    +
Sbjct: 165 LALAGQPLPNDDIITYILAGLGQEYDSLASTISSRRDPVSLEELFSLLLICESRINHNNQ 224

Query: 21  ALLPT 7
            LLP+
Sbjct: 225 PLLPS 229



 Score = 47.4 bits (111), Expect(2) = 6e-13
 Identities = 23/77 (29%), Positives = 41/77 (53%)
 Frame = -3

Query: 434 DKKLMIWIHATLFE*ILPCVIGSKTSSELWLSLEKRLAHFKLTHQVQLRQDLQNQSKGTL 255
           D  ++  I+++L E +L  V+   TS E+WL+LE   +       +Q+R  L N  KG +
Sbjct: 90  DSLILATINSSLTEDVLTQVMSYTTSREVWLALENNFSSLSRAKVIQIRTQLANAKKGAM 149

Query: 254 STAEYLQRIRHLRDMLA 204
           +  E+   ++ + D LA
Sbjct: 150 TANEFFLSVKRMADELA 166


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