BLASTX nr result

ID: Coptis24_contig00035564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035564
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635244.1| PREDICTED: UPF0361 protein C3orf37 homolog [...   132   5e-49
ref|XP_003532247.1| PREDICTED: UPF0361 protein C3orf37 homolog [...   133   6e-49
emb|CAN82703.1| hypothetical protein VITISV_026469 [Vitis vinifera]   132   4e-48
ref|XP_002527247.1| conserved hypothetical protein [Ricinus comm...   125   1e-46
ref|XP_003622783.1| hypothetical protein MTR_7g052250 [Medicago ...   124   2e-46

>ref|XP_003635244.1| PREDICTED: UPF0361 protein C3orf37 homolog [Vitis vinifera]
           gi|296090568|emb|CBI40918.3| unnamed protein product
           [Vitis vinifera]
          Length = 392

 Score =  132 bits (333), Expect(2) = 5e-49
 Identities = 62/96 (64%), Positives = 73/96 (76%)
 Frame = -3

Query: 447 MCGRARCTVRADDIPSACHITNGFTSTHQMDQYRPRYNVSPGSYMPVVRRCHGQVQGGVA 268
           MCGRARCT+R D+I  AC++    T   QMD+YRP YNVSPG+ +PVVRR  G       
Sbjct: 1   MCGRARCTLRPDNIARACNLNTLPTQNIQMDRYRPSYNVSPGANLPVVRRGGGTEGEEAI 60

Query: 267 LHCMKWGLVPSFTKKTDKVDHYKMFNAGSESICEKA 160
           +HCMKWGLVPSFTKK++K DHYKMFNA SES+CEKA
Sbjct: 61  VHCMKWGLVPSFTKKSEKPDHYKMFNARSESVCEKA 96



 Score = 87.0 bits (214), Expect(2) = 5e-49
 Identities = 38/55 (69%), Positives = 46/55 (83%)
 Frame = -2

Query: 166 KSIVTVEGFYEWKKDGSNKQPFYIHLKNGQPLVFAALYDSWVNSEGKFTNSYFIL 2
           + +V VEGFYEWKKDGS KQP+YIHLK+G+PLVFAAL+DSW NSEG+   +  IL
Sbjct: 106 RCLVAVEGFYEWKKDGSKKQPYYIHLKDGRPLVFAALFDSWANSEGEILYTCTIL 160


>ref|XP_003532247.1| PREDICTED: UPF0361 protein C3orf37 homolog [Glycine max]
          Length = 382

 Score =  133 bits (334), Expect(2) = 6e-49
 Identities = 63/96 (65%), Positives = 72/96 (75%)
 Frame = -3

Query: 447 MCGRARCTVRADDIPSACHITNGFTSTHQMDQYRPRYNVSPGSYMPVVRRCHGQVQGGVA 268
           MCGRARCT+RADD+P ACH +   T T  +D+YRP YNVSPG  +PVVRR       G  
Sbjct: 1   MCGRARCTLRADDVPRACHRSTSPTRTLHIDRYRPAYNVSPGFDVPVVRRDDASGGEGYV 60

Query: 267 LHCMKWGLVPSFTKKTDKVDHYKMFNAGSESICEKA 160
           L CMKWGL+PSFTKKT+K DHY+MFNA SESI EKA
Sbjct: 61  LQCMKWGLIPSFTKKTEKPDHYRMFNARSESIDEKA 96



 Score = 86.3 bits (212), Expect(2) = 6e-49
 Identities = 37/55 (67%), Positives = 46/55 (83%)
 Frame = -2

Query: 166 KSIVTVEGFYEWKKDGSNKQPFYIHLKNGQPLVFAALYDSWVNSEGKFTNSYFIL 2
           + +V VEGFYEWKKDGS KQP+YIH K+G+PLVFAALYDSW NSEG+   ++ I+
Sbjct: 106 RCLVAVEGFYEWKKDGSKKQPYYIHFKDGRPLVFAALYDSWQNSEGETLYTFTIV 160


>emb|CAN82703.1| hypothetical protein VITISV_026469 [Vitis vinifera]
          Length = 370

 Score =  132 bits (333), Expect(2) = 4e-48
 Identities = 62/96 (64%), Positives = 73/96 (76%)
 Frame = -3

Query: 447 MCGRARCTVRADDIPSACHITNGFTSTHQMDQYRPRYNVSPGSYMPVVRRCHGQVQGGVA 268
           MCGRARCT+R D+I  AC++    T   QMD+YRP YNVSPG+ +PVVRR  G       
Sbjct: 1   MCGRARCTLRPDNIARACNLNTLPTQNIQMDRYRPSYNVSPGANLPVVRRGGGTEGEEAI 60

Query: 267 LHCMKWGLVPSFTKKTDKVDHYKMFNAGSESICEKA 160
           +HCMKWGLVPSFTKK++K DHYKMFNA SES+CEKA
Sbjct: 61  VHCMKWGLVPSFTKKSEKPDHYKMFNARSESVCEKA 96



 Score = 84.0 bits (206), Expect(2) = 4e-48
 Identities = 35/47 (74%), Positives = 42/47 (89%)
 Frame = -2

Query: 166 KSIVTVEGFYEWKKDGSNKQPFYIHLKNGQPLVFAALYDSWVNSEGK 26
           + +V VEGFYEWKKDGS KQP+YIHLK+G+PLVFAAL+DSW NSE +
Sbjct: 106 RCLVAVEGFYEWKKDGSKKQPYYIHLKDGRPLVFAALFDSWANSEDR 152


>ref|XP_002527247.1| conserved hypothetical protein [Ricinus communis]
           gi|223533340|gb|EEF35091.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 409

 Score =  125 bits (313), Expect(2) = 1e-46
 Identities = 63/98 (64%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
 Frame = -3

Query: 447 MCGRARCTVRADDIPSACHITNGFTSTHQMDQYRPRYNVSPGSYMPVVRRCHGQVQG--G 274
           MCGRARCT+RADDIP ACH T G   +  MD++RP YNVSPGS MPVV R      G  G
Sbjct: 1   MCGRARCTLRADDIPRACHRTTGPVRSVNMDRWRPSYNVSPGSNMPVVCREGDGSDGGDG 60

Query: 273 VALHCMKWGLVPSFTKKTDKVDHYKMFNAGSESICEKA 160
             + CM WGL+PSFTKKT+K D YKMFNA SES+ EKA
Sbjct: 61  FFVQCMTWGLIPSFTKKTEKPDFYKMFNARSESVGEKA 98



 Score = 86.7 bits (213), Expect(2) = 1e-46
 Identities = 37/55 (67%), Positives = 45/55 (81%)
 Frame = -2

Query: 166 KSIVTVEGFYEWKKDGSNKQPFYIHLKNGQPLVFAALYDSWVNSEGKFTNSYFIL 2
           + +V  EGFYEWKKDGS KQP+YIH K+G+PLVFAALYDSW NSEG+   ++ IL
Sbjct: 108 RCLVAAEGFYEWKKDGSKKQPYYIHFKDGRPLVFAALYDSWQNSEGEILYTFTIL 162


>ref|XP_003622783.1| hypothetical protein MTR_7g052250 [Medicago truncatula]
           gi|355497798|gb|AES79001.1| hypothetical protein
           MTR_7g052250 [Medicago truncatula]
          Length = 354

 Score =  124 bits (311), Expect(2) = 2e-46
 Identities = 61/98 (62%), Positives = 70/98 (71%), Gaps = 2/98 (2%)
 Frame = -3

Query: 447 MCGRARCTVRADDIPSACHITNGFTSTHQMDQYRPRYNVSPGSYMPVVRRCHGQV--QGG 274
           MCGR RC++RADD+P ACH T   +    +D+YRP  NVSPG  +PVVRR         G
Sbjct: 1   MCGRTRCSLRADDVPRACHRTTAPSRLLHIDRYRPSNNVSPGFNIPVVRREDNASAESDG 60

Query: 273 VALHCMKWGLVPSFTKKTDKVDHYKMFNAGSESICEKA 160
             +HCMKWGL+PSFTKKTDK DHYKMFNA SESI EKA
Sbjct: 61  HVVHCMKWGLIPSFTKKTDKPDHYKMFNARSESIDEKA 98



 Score = 87.0 bits (214), Expect(2) = 2e-46
 Identities = 37/55 (67%), Positives = 46/55 (83%)
 Frame = -2

Query: 166 KSIVTVEGFYEWKKDGSNKQPFYIHLKNGQPLVFAALYDSWVNSEGKFTNSYFIL 2
           + +V VEGFYEWKKDGS KQP+YIH K+G+PLVFAALYDSW NSEG+   ++ I+
Sbjct: 108 RCLVAVEGFYEWKKDGSKKQPYYIHFKDGRPLVFAALYDSWQNSEGEILYTFTIV 162


Top