BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035560
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD39277.1|AC007203_9 Hypothetical protein [Arabidopsis thali...   136   2e-30
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]           134   8e-30
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ...   131   5e-29
ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcript...   127   7e-28
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   127   7e-28

>gb|AAD39277.1|AC007203_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 355

 Score =  136 bits (343), Expect = 2e-30
 Identities = 63/128 (49%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
 Frame = +1

Query: 4   LPVKYLGLPLITTRLKARDFTPLIKKVRQRIQAWKGRALSYAKRLQLLKAVLNGMSMYWT 183
           LPV+YLGLPL+T  + A D+ PLI+K+R+RI +W GR LSY  RLQL+K+VL  ++ +W+
Sbjct: 12  LPVRYLGLPLMTKAMTAHDYLPLIEKIRKRISSWTGRFLSYCGRLQLIKSVLMSITNFWS 71

Query: 184 TSFVLPQSTIDAIN*LCRNFLWNGPECSTSHALISWDDICFPY-EGGLGIRSLKVLNVAA 360
           ++F LP + +  I  LC  FLW+GP+  T +A I+W  +C P  EGGLG+R LK +N   
Sbjct: 72  SAFRLPGNCMKEIERLCSAFLWSGPDLKTHNAKIAWSKVCLPMCEGGLGLRPLKEINTVC 131

Query: 361 NLKHLWNL 384
            LK +W L
Sbjct: 132 GLKLIWRL 139


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score =  134 bits (337), Expect = 8e-30
 Identities = 61/129 (47%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
 Frame = +1

Query: 1   ALPVKYLGLPLITTRLKARDFTPLIKKVRQRIQAWKGRALSYAKRLQLLKAVLNGMSMYW 180
           ALPV+YLGLPL+T ++   D+ PL++K+R RI  W  R LS+A RLQL+ +V++ ++ +W
Sbjct: 22  ALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNFW 81

Query: 181 TTSFVLPQSTIDAIN*LCRNFLWNGPECSTSHALISWDDICFPY-EGGLGIRSLKVLNVA 357
            ++F LP + I  I+ +C +FLW+GPE +T  A ++W D+C P  EGGLGIRSLK  N  
Sbjct: 82  MSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEANKV 141

Query: 358 ANLKHLWNL 384
           + LK +W +
Sbjct: 142 SLLKLIWRM 150


>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1115

 Score =  131 bits (330), Expect = 5e-29
 Identities = 61/127 (48%), Positives = 84/127 (66%)
 Frame = +1

Query: 4    LPVKYLGLPLITTRLKARDFTPLIKKVRQRIQAWKGRALSYAKRLQLLKAVLNGMSMYWT 183
            LPV+YLGLPL+T RL   D +PL +++R RI  W  R LS+A RL L+ +VL     +W 
Sbjct: 684  LPVRYLGLPLVTKRLTKEDLSPLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWM 743

Query: 184  TSFVLPQSTIDAIN*LCRNFLWNGPECSTSHALISWDDICFPYEGGLGIRSLKVLNVAAN 363
            ++F LP + +  IN +C  FLW+GPE +   A +SWDDIC P +GGLG+RSL   NV + 
Sbjct: 744  SAFRLPSACLKEINSICSAFLWSGPELNRRKAKVSWDDICKPKQGGLGLRSLTEANVVSV 803

Query: 364  LKHLWNL 384
            LK +W +
Sbjct: 804  LKLIWRV 810


>ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcriptase)-related protein
           [Arabidopsis thaliana] gi|332643359|gb|AEE76880.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related protein [Arabidopsis thaliana]
          Length = 746

 Score =  127 bits (320), Expect = 7e-28
 Identities = 58/118 (49%), Positives = 85/118 (72%), Gaps = 1/118 (0%)
 Frame = +1

Query: 1   ALPVKYLGLPLITTRLKARDFTPLIKKVRQRIQAWKGRALSYAKRLQLLKAVLNGMSMYW 180
           ALPV+YLGLPL+T ++   D+ PL++K+R RI  W  R LS+A RLQL+ +V++ ++ +W
Sbjct: 22  ALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNFW 81

Query: 181 TTSFVLPQSTIDAIN*LCRNFLWNGPECSTSHALISWDDICFPY-EGGLGIRSLKVLN 351
            ++F LP + I  I+ +C +FLW+GPE +T  A ++W D+C P  EGGLGIRSLK  N
Sbjct: 82  MSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEAN 139


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/128 (48%), Positives = 83/128 (64%), Gaps = 1/128 (0%)
 Frame = +1

Query: 4   LPVKYLGLPLITTRLKARDFTPLIKKVRQRIQAWKGRALSYAKRLQLLKAVLNGMSMYWT 183
           LPV+YLGLPL+T RL   D +PL +++R RI  W  R LS+A RL L+ +VL     +W 
Sbjct: 172 LPVRYLGLPLVTKRLTKEDLSPLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWM 231

Query: 184 TSFVLPQSTIDAIN*LCRNFLWNGPECSTSHALISWDDICFP-YEGGLGIRSLKVLNVAA 360
           ++F LP + +  IN +C  FLW+GPE     A +SWDDIC P  EGGLG+RSL   NV +
Sbjct: 232 SAFRLPSACLKEINSICSAFLWSGPELHRRKAKVSWDDICKPKQEGGLGLRSLTEANVVS 291

Query: 361 NLKHLWNL 384
            LK +W +
Sbjct: 292 VLKLIWRV 299