BLASTX nr result

ID: Coptis24_contig00035547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035547
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524465.1| axonemal dynein light chain, putative [Ricin...    80   2e-13
ref|XP_002281900.1| PREDICTED: uncharacterized protein LOC100259...    71   1e-10
emb|CAN63502.1| hypothetical protein VITISV_011677 [Vitis vinifera]    65   4e-09
ref|XP_003550827.1| PREDICTED: uncharacterized protein LOC100791...    55   8e-06
ref|XP_003541506.1| PREDICTED: uncharacterized protein LOC100818...    55   8e-06

>ref|XP_002524465.1| axonemal dynein light chain, putative [Ricinus communis]
           gi|223536253|gb|EEF37905.1| axonemal dynein light chain,
           putative [Ricinus communis]
          Length = 184

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
 Frame = +2

Query: 113 KQRRGTMTF-FYNSGAGNRTPVVDLAKKAKKPLSRLLWGLRKPKVQNNQEIENHAIIKEN 289
           KQ+RG     FY S + N  P ++      KPLS  L+     K++N+ + E  A  +  
Sbjct: 7   KQKRGNFLMNFYKSSSKNYKPKIEPNVVINKPLSHNLFSR---KLENSYQ-ETTAAERVG 62

Query: 290 EQVKKLVEARKSMSHIETNLTSVATFLHVKVLAVDMPGYMQVH 418
           E+   +VEARKS+SH+ETNL SVA+FL VKVL  DMPG+MQ+H
Sbjct: 63  ERGNVMVEARKSVSHVETNLASVASFLQVKVLVTDMPGFMQIH 105


>ref|XP_002281900.1| PREDICTED: uncharacterized protein LOC100259374 [Vitis vinifera]
           gi|297738927|emb|CBI28172.3| unnamed protein product
           [Vitis vinifera]
          Length = 181

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 46/103 (44%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
 Frame = +2

Query: 113 KQRRGTMTFFYNSGAGNRTPVVDLAKKAKKPLSRLLWGLRKPKV-QNNQEIENHAIIKEN 289
           K+ RG +   Y+SG G +     L+ K +   S   WGLRK K  + N +     +++  
Sbjct: 6   KKERGLLCV-YSSGEGEKKSEERLSVKKQVGWS---WGLRKSKTCRENAQYGGERVVEGG 61

Query: 290 EQVKKLVEARKSMSHIETNLTSVATFLHVKVLAVDMPGYMQVH 418
             V  +VEARKS+S IETN++SVA FL VKVL  DMPG+MQVH
Sbjct: 62  GGV--VVEARKSVSCIETNVSSVAAFLQVKVLVTDMPGFMQVH 102


>emb|CAN63502.1| hypothetical protein VITISV_011677 [Vitis vinifera]
          Length = 184

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
 Frame = +2

Query: 113 KQRRGTMTFFYNSGAGNRTPVVDLAKKAKKPLSRLLWGLRKPK--VQNNQEIENHAIIKE 286
           K+ RG +   Y+SG G +     L+ K +   S   WGLRK K  ++  Q      +   
Sbjct: 6   KKERGLLCV-YSSGEGEKKSEERLSVKKQVGWS---WGLRKSKTCLEKAQYGGERVVEGG 61

Query: 287 NEQVKKLVEARKSMSHIETNLTSVATFLHVKVLAVDMPGYMQVH 418
                 +VEARKS+S IETN++SVA FL VKVL  DMPG+MQVH
Sbjct: 62  GGGGGVVVEARKSVSCIETNVSSVAAFLQVKVLVTDMPGFMQVH 105


>ref|XP_003550827.1| PREDICTED: uncharacterized protein LOC100791759 [Glycine max]
          Length = 210

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = +2

Query: 278 IKENEQVKKLVEARKSMSHIETNLTSVATFLHVKVLAVDMPGYMQVH 418
           I++N  V+ +VEARKS+SHIET L+SV  +L VKVL  DMP +MQVH
Sbjct: 123 IEKNFAVEGMVEARKSVSHIET-LSSVIAYLQVKVLVSDMPTFMQVH 168


>ref|XP_003541506.1| PREDICTED: uncharacterized protein LOC100818075 [Glycine max]
          Length = 209

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/47 (61%), Positives = 36/47 (76%)
 Frame = +2

Query: 278 IKENEQVKKLVEARKSMSHIETNLTSVATFLHVKVLAVDMPGYMQVH 418
           I++N  V  +VEARKS+SHIET L+SV  +L VKVL  DMP +MQVH
Sbjct: 122 IEKNFAVAGMVEARKSVSHIET-LSSVIAYLQVKVLVSDMPSFMQVH 167


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