BLASTX nr result
ID: Coptis24_contig00035547
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035547 (418 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524465.1| axonemal dynein light chain, putative [Ricin... 80 2e-13 ref|XP_002281900.1| PREDICTED: uncharacterized protein LOC100259... 71 1e-10 emb|CAN63502.1| hypothetical protein VITISV_011677 [Vitis vinifera] 65 4e-09 ref|XP_003550827.1| PREDICTED: uncharacterized protein LOC100791... 55 8e-06 ref|XP_003541506.1| PREDICTED: uncharacterized protein LOC100818... 55 8e-06 >ref|XP_002524465.1| axonemal dynein light chain, putative [Ricinus communis] gi|223536253|gb|EEF37905.1| axonemal dynein light chain, putative [Ricinus communis] Length = 184 Score = 80.1 bits (196), Expect = 2e-13 Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 1/103 (0%) Frame = +2 Query: 113 KQRRGTMTF-FYNSGAGNRTPVVDLAKKAKKPLSRLLWGLRKPKVQNNQEIENHAIIKEN 289 KQ+RG FY S + N P ++ KPLS L+ K++N+ + E A + Sbjct: 7 KQKRGNFLMNFYKSSSKNYKPKIEPNVVINKPLSHNLFSR---KLENSYQ-ETTAAERVG 62 Query: 290 EQVKKLVEARKSMSHIETNLTSVATFLHVKVLAVDMPGYMQVH 418 E+ +VEARKS+SH+ETNL SVA+FL VKVL DMPG+MQ+H Sbjct: 63 ERGNVMVEARKSVSHVETNLASVASFLQVKVLVTDMPGFMQIH 105 >ref|XP_002281900.1| PREDICTED: uncharacterized protein LOC100259374 [Vitis vinifera] gi|297738927|emb|CBI28172.3| unnamed protein product [Vitis vinifera] Length = 181 Score = 70.9 bits (172), Expect = 1e-10 Identities = 46/103 (44%), Positives = 62/103 (60%), Gaps = 1/103 (0%) Frame = +2 Query: 113 KQRRGTMTFFYNSGAGNRTPVVDLAKKAKKPLSRLLWGLRKPKV-QNNQEIENHAIIKEN 289 K+ RG + Y+SG G + L+ K + S WGLRK K + N + +++ Sbjct: 6 KKERGLLCV-YSSGEGEKKSEERLSVKKQVGWS---WGLRKSKTCRENAQYGGERVVEGG 61 Query: 290 EQVKKLVEARKSMSHIETNLTSVATFLHVKVLAVDMPGYMQVH 418 V +VEARKS+S IETN++SVA FL VKVL DMPG+MQVH Sbjct: 62 GGV--VVEARKSVSCIETNVSSVAAFLQVKVLVTDMPGFMQVH 102 >emb|CAN63502.1| hypothetical protein VITISV_011677 [Vitis vinifera] Length = 184 Score = 65.5 bits (158), Expect = 4e-09 Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 2/104 (1%) Frame = +2 Query: 113 KQRRGTMTFFYNSGAGNRTPVVDLAKKAKKPLSRLLWGLRKPK--VQNNQEIENHAIIKE 286 K+ RG + Y+SG G + L+ K + S WGLRK K ++ Q + Sbjct: 6 KKERGLLCV-YSSGEGEKKSEERLSVKKQVGWS---WGLRKSKTCLEKAQYGGERVVEGG 61 Query: 287 NEQVKKLVEARKSMSHIETNLTSVATFLHVKVLAVDMPGYMQVH 418 +VEARKS+S IETN++SVA FL VKVL DMPG+MQVH Sbjct: 62 GGGGGVVVEARKSVSCIETNVSSVAAFLQVKVLVTDMPGFMQVH 105 >ref|XP_003550827.1| PREDICTED: uncharacterized protein LOC100791759 [Glycine max] Length = 210 Score = 54.7 bits (130), Expect = 8e-06 Identities = 29/47 (61%), Positives = 37/47 (78%) Frame = +2 Query: 278 IKENEQVKKLVEARKSMSHIETNLTSVATFLHVKVLAVDMPGYMQVH 418 I++N V+ +VEARKS+SHIET L+SV +L VKVL DMP +MQVH Sbjct: 123 IEKNFAVEGMVEARKSVSHIET-LSSVIAYLQVKVLVSDMPTFMQVH 168 >ref|XP_003541506.1| PREDICTED: uncharacterized protein LOC100818075 [Glycine max] Length = 209 Score = 54.7 bits (130), Expect = 8e-06 Identities = 29/47 (61%), Positives = 36/47 (76%) Frame = +2 Query: 278 IKENEQVKKLVEARKSMSHIETNLTSVATFLHVKVLAVDMPGYMQVH 418 I++N V +VEARKS+SHIET L+SV +L VKVL DMP +MQVH Sbjct: 122 IEKNFAVAGMVEARKSVSHIET-LSSVIAYLQVKVLVSDMPSFMQVH 167