BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035543
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu...   120   1e-25
emb|CBI40923.3| unnamed protein product [Vitis vinifera]              112   4e-23
emb|CAN83063.1| hypothetical protein VITISV_010308 [Vitis vinifera]   112   4e-23
ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cuc...   109   2e-22
ref|XP_004147263.1| PREDICTED: uncharacterized protein LOC101213...   109   2e-22

>ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
           gi|223536320|gb|EEF37970.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 1744

 Score =  120 bits (300), Expect = 1e-25
 Identities = 63/137 (45%), Positives = 87/137 (63%), Gaps = 1/137 (0%)
 Frame = +1

Query: 1   VTSLTKSFNTVPSAAIPSILDCILASTGXXXXXXXXXXXXXXXTHI-KNFFEEDHGKMDS 177
           ++SL++SF  VP +AIP+ILDCILASTG                H+ K F +E+  K+D 
Sbjct: 5   ISSLSRSFKKVPLSAIPAILDCILASTGLSPSSLFDSFL-----HVTKEFIKEE--KLDY 57

Query: 178 AQCGYISSFTNALCYLLNKSGTQPSDLQSFIWRAFIPVMKIVNANEHELLGLIAEQISDV 357
           + C Y+ S   ALC+LL K G  P  +QS IW+ FIP+MK+ +A E E+L  IAE   DV
Sbjct: 58  SHCDYLISMVGALCHLLKKPGADPDSMQSLIWKCFIPLMKMAHALEREMLNQIAESFFDV 117

Query: 358 VTKSNTWEVIGASLVPF 408
           V  +N+W+V+ A+LVPF
Sbjct: 118 VNVTNSWDVLEATLVPF 134


>emb|CBI40923.3| unnamed protein product [Vitis vinifera]
          Length = 6988

 Score =  112 bits (279), Expect = 4e-23
 Identities = 59/136 (43%), Positives = 80/136 (58%)
 Frame = +1

Query: 1   VTSLTKSFNTVPSAAIPSILDCILASTGXXXXXXXXXXXXXXXTHIKNFFEEDHGKMDSA 180
           V+SL+ SF  VP A IP++LDCILA+T                   K+   +D  K+DS 
Sbjct: 5   VSSLSNSFRQVPQAGIPAMLDCILAATASSPSSLFALLLDAFHDLTKDI-AKDGKKLDSD 63

Query: 181 QCGYISSFTNALCYLLNKSGTQPSDLQSFIWRAFIPVMKIVNANEHELLGLIAEQISDVV 360
           QC ++SSF   +C+LL KSG      QSF W+ FIP+MKIV+A + E+L    E   DVV
Sbjct: 64  QCNHVSSFVCGVCHLLEKSGVNSDAFQSFTWKCFIPLMKIVHACDREMLNQTTESFVDVV 123

Query: 361 TKSNTWEVIGASLVPF 408
            K+N+W V+  +LVPF
Sbjct: 124 IKTNSWGVLEETLVPF 139


>emb|CAN83063.1| hypothetical protein VITISV_010308 [Vitis vinifera]
          Length = 988

 Score =  112 bits (279), Expect = 4e-23
 Identities = 59/136 (43%), Positives = 80/136 (58%)
 Frame = +1

Query: 1   VTSLTKSFNTVPSAAIPSILDCILASTGXXXXXXXXXXXXXXXTHIKNFFEEDHGKMDSA 180
           V+SL+ SF  VP A IP++LDCILA+T                   K+   +D  K+DS 
Sbjct: 5   VSSLSNSFRQVPQAGIPAMLDCILAATASSPSSLFALLLDAFHDLTKDI-AKDGKKLDSD 63

Query: 181 QCGYISSFTNALCYLLNKSGTQPSDLQSFIWRAFIPVMKIVNANEHELLGLIAEQISDVV 360
           QC ++SSF   +C+LL KSG      QSF W+ FIP+MKIV+A + E+L    E   DVV
Sbjct: 64  QCNHVSSFVCGVCHLLEKSGVNSDAFQSFTWKCFIPLMKIVHACDREMLNQTTESFVDVV 123

Query: 361 TKSNTWEVIGASLVPF 408
            K+N+W V+  +LVPF
Sbjct: 124 IKTNSWGVLEETLVPF 139


>ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cucumis sativus]
          Length = 1833

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/135 (38%), Positives = 83/135 (61%)
 Frame = +1

Query: 4   TSLTKSFNTVPSAAIPSILDCILASTGXXXXXXXXXXXXXXXTHIKNFFEEDHGKMDSAQ 183
           +SL++SF  VP  A+P+ILDC+ ASTG                 I +   ++ GK+D+ Q
Sbjct: 6   SSLSESFRRVPPMAVPAILDCLFASTGLSSSELFDSLLETFPKTIDDATTKE-GKLDADQ 64

Query: 184 CGYISSFTNALCYLLNKSGTQPSDLQSFIWRAFIPVMKIVNANEHELLGLIAEQISDVVT 363
           C YI+S   ALC++L K G  P+ L+SFIW++F+P++        E+L  ++E   DVVT
Sbjct: 65  CNYITSLVCALCHILKKDGADPTALKSFIWKSFVPLINKTATLNREMLNQVSESFIDVVT 124

Query: 364 KSNTWEVIGASLVPF 408
           ++N+W ++ A+L+PF
Sbjct: 125 ETNSWPIVEATLIPF 139


>ref|XP_004147263.1| PREDICTED: uncharacterized protein LOC101213211 [Cucumis sativus]
          Length = 1833

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/135 (38%), Positives = 83/135 (61%)
 Frame = +1

Query: 4   TSLTKSFNTVPSAAIPSILDCILASTGXXXXXXXXXXXXXXXTHIKNFFEEDHGKMDSAQ 183
           +SL++SF  VP  A+P+ILDC+ ASTG                 I +   ++ GK+D+ Q
Sbjct: 6   SSLSESFRRVPPMAVPAILDCLFASTGLSSSELFDSLLETFPKTIDDATTKE-GKLDADQ 64

Query: 184 CGYISSFTNALCYLLNKSGTQPSDLQSFIWRAFIPVMKIVNANEHELLGLIAEQISDVVT 363
           C YI+S   ALC++L K G  P+ L+SFIW++F+P++        E+L  ++E   DVVT
Sbjct: 65  CNYITSLVCALCHILKKDGADPTALKSFIWKSFVPLINKTATLNREMLNQVSESFIDVVT 124

Query: 364 KSNTWEVIGASLVPF 408
           ++N+W ++ A+L+PF
Sbjct: 125 ETNSWPIVEATLIPF 139