BLASTX nr result

ID: Coptis24_contig00035524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035524
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328985.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09
ref|XP_002520009.1| conserved hypothetical protein [Ricinus comm...    61   2e-07
ref|XP_002331774.1| predicted protein [Populus trichocarpa] gi|2...    61   2e-07
ref|NP_186963.1| uncharacterized protein [Arabidopsis thaliana] ...    58   1e-06
ref|XP_003538933.1| PREDICTED: uncharacterized protein LOC100793...    58   1e-06

>ref|XP_002328985.1| predicted protein [Populus trichocarpa] gi|222839219|gb|EEE77570.1|
           predicted protein [Populus trichocarpa]
          Length = 729

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 43/90 (47%), Positives = 50/90 (55%)
 Frame = +1

Query: 157 VDFCSLPRKELQALCKKNKIPANWTNKAMADALTDLTKKEGQKNKEATLQDESSGPPLKR 336
           +DF SL RK+LQALCKKNKIPAN TN +MADAL  L K EG       L + ++ PP   
Sbjct: 1   MDFHSLSRKDLQALCKKNKIPANMTNISMADALKVLDKVEG-------LDEFTNAPP--- 50

Query: 337 MCLGKQEDHASPSGVTSIRKQRTRRHTSTR 426
               K +   SP    S    RT   TSTR
Sbjct: 51  ----KSDSQQSPEKAGSNEILRTSCRTSTR 76


>ref|XP_002520009.1| conserved hypothetical protein [Ricinus communis]
           gi|223540773|gb|EEF42333.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 737

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/41 (75%), Positives = 33/41 (80%)
 Frame = +1

Query: 157 VDFCSLPRKELQALCKKNKIPANWTNKAMADALTDLTKKEG 279
           +DF SL RKELQALCKKNKIPAN TN AMADAL  L K +G
Sbjct: 1   MDFHSLARKELQALCKKNKIPANMTNVAMADALKALEKVDG 41


>ref|XP_002331774.1| predicted protein [Populus trichocarpa] gi|222875001|gb|EEF12132.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 39/96 (40%), Positives = 50/96 (52%)
 Frame = +1

Query: 157 VDFCSLPRKELQALCKKNKIPANWTNKAMADALTDLTKKEGQKNKEATLQDESSGPPLKR 336
           +DF SL RKELQ LCKKNKIPAN TN AMADAL  L K EG++      + +    P K 
Sbjct: 1   MDFHSLSRKELQDLCKKNKIPANMTNIAMADALKVLDKVEGREEFTNVPEPDPQQSPEKA 60

Query: 337 MCLGKQEDHASPSGVTSIRKQRTRRHTSTRLSFGLC 444
           +    +    S   +T  +  R    +S  L+   C
Sbjct: 61  ISGSPEVPQTSVRTLTRRKPLRIEPESSKPLTRTRC 96


>ref|NP_186963.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6714423|gb|AAF26111.1|AC012328_14 hypothetical
           protein [Arabidopsis thaliana]
           gi|61742693|gb|AAX55167.1| hypothetical protein
           At3g03130 [Arabidopsis thaliana]
           gi|332640384|gb|AEE73905.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 520

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/53 (56%), Positives = 36/53 (67%)
 Frame = +1

Query: 157 VDFCSLPRKELQALCKKNKIPANWTNKAMADALTDLTKKEGQKNKEATLQDES 315
           +DF SLPR++LQ  CK+NKIPAN TN AMADAL DL   EG        +D+S
Sbjct: 1   MDFHSLPRRDLQFFCKRNKIPANMTNIAMADALRDLEIVEGMDEFMDPSRDQS 53


>ref|XP_003538933.1| PREDICTED: uncharacterized protein LOC100793550 [Glycine max]
          Length = 722

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = +1

Query: 157 VDFCSLPRKELQALCKKNKIPANWTNKAMADALTDLTKKEG 279
           +DF +L RK+LQALCKKNKIPAN TN AMADAL  L + EG
Sbjct: 1   MDFHTLSRKQLQALCKKNKIPANITNVAMADALAALNQVEG 41


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