BLASTX nr result

ID: Coptis24_contig00035523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035523
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267976.2| PREDICTED: uncharacterized protein LOC100263...    70   2e-10
emb|CBI27347.3| unnamed protein product [Vitis vinifera]               70   2e-10
emb|CAN68733.1| hypothetical protein VITISV_012100 [Vitis vinifera]    68   9e-10
gb|ADV29635.1| At5g37260-like protein [Solanum arcanum]                64   1e-08
gb|ADV29607.1| At5g37260-like protein [Solanum arcanum]                62   5e-08

>ref|XP_002267976.2| PREDICTED: uncharacterized protein LOC100263252 [Vitis vinifera]
          Length = 495

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/68 (48%), Positives = 44/68 (64%)
 Frame = +1

Query: 43  SAQDQGERTNLRTIVTSSTRMGSDIEAQSSTATQLKEMNTAEDENAPKARKPYTISKQRE 222
           + +DQ   +   T +++   +  D    S TA +LKE  +  D+ APKARKPYTI+KQRE
Sbjct: 2   TVEDQSGGSRSNTFLSAGNLISLDAGTHSLTAAELKEQFSCRDDLAPKARKPYTITKQRE 61

Query: 223 RWTEEEHK 246
           RWTEEEHK
Sbjct: 62  RWTEEEHK 69


>emb|CBI27347.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/68 (48%), Positives = 44/68 (64%)
 Frame = +1

Query: 43  SAQDQGERTNLRTIVTSSTRMGSDIEAQSSTATQLKEMNTAEDENAPKARKPYTISKQRE 222
           + +DQ   +   T +++   +  D    S TA +LKE  +  D+ APKARKPYTI+KQRE
Sbjct: 2   TVEDQSGGSRSNTFLSAGNLISLDAGTHSLTAAELKEQFSCRDDLAPKARKPYTITKQRE 61

Query: 223 RWTEEEHK 246
           RWTEEEHK
Sbjct: 62  RWTEEEHK 69


>emb|CAN68733.1| hypothetical protein VITISV_012100 [Vitis vinifera]
          Length = 543

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/69 (49%), Positives = 44/69 (63%)
 Frame = +1

Query: 40  YSAQDQGERTNLRTIVTSSTRMGSDIEAQSSTATQLKEMNTAEDENAPKARKPYTISKQR 219
           +  Q  G R+N  T +++   +  D    S TA +LK   +  D+ APKARKPYTI+KQR
Sbjct: 51  FDDQSGGSRSN--TFLSAGNLISLDAGTHSLTAAELKXQFSCRDDLAPKARKPYTITKQR 108

Query: 220 ERWTEEEHK 246
           ERWTEEEHK
Sbjct: 109 ERWTEEEHK 117


>gb|ADV29635.1| At5g37260-like protein [Solanum arcanum]
          Length = 443

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/49 (61%), Positives = 35/49 (71%)
 Frame = +1

Query: 100 RMGSDIEAQSSTATQLKEMNTAEDENAPKARKPYTISKQRERWTEEEHK 246
           RM  D+ A S  + Q+ E    E+E APK RKPYTISKQRERW+EEEHK
Sbjct: 1   RMSVDVGAPSPRSIQMDEQVNPEEEYAPKIRKPYTISKQRERWSEEEHK 49


>gb|ADV29607.1| At5g37260-like protein [Solanum arcanum]
          Length = 446

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/49 (59%), Positives = 35/49 (71%)
 Frame = +1

Query: 100 RMGSDIEAQSSTATQLKEMNTAEDENAPKARKPYTISKQRERWTEEEHK 246
           RM  D+ A S  + Q+ E+    +E APK RKPYTISKQRERW+EEEHK
Sbjct: 1   RMSVDVGAPSPRSIQMDELVNPGEEYAPKIRKPYTISKQRERWSEEEHK 49


Top