BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035507
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271201.1| PREDICTED: probable DNA replication complex ...   167   2e-39
ref|XP_004138422.1| PREDICTED: DNA replication complex GINS prot...   152   6e-35
gb|AFK34889.1| unknown [Medicago truncatula]                          149   5e-34
ref|XP_003600887.1| DNA replication complex GINS protein PSF3 [M...   149   5e-34
dbj|BAK07935.1| predicted protein [Hordeum vulgare subsp. vulgare]    147   1e-33

>ref|XP_002271201.1| PREDICTED: probable DNA replication complex GINS protein PSF3
           [Vitis vinifera] gi|147828134|emb|CAN64086.1|
           hypothetical protein VITISV_006937 [Vitis vinifera]
           gi|297736610|emb|CBI25481.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  167 bits (422), Expect = 2e-39
 Identities = 82/103 (79%), Positives = 89/103 (86%), Gaps = 1/103 (0%)
 Frame = -2

Query: 598 CVDLKSRCSYFYELGCKVAPLIGDRTIGSFLLYAFTGRYKEVLSKAHSAAFIMAPKFLTL 419
           CVDL+SRC YFYELGCKVAPL+GDRTIGS LL AF  RYKEVLSKAH+AA    PK LTL
Sbjct: 84  CVDLRSRCPYFYELGCKVAPLVGDRTIGSLLLQAFLSRYKEVLSKAHTAASTPVPKVLTL 143

Query: 418 LTKEETQLYEAARSSMTAFKKWRVGGPRFERASIL-RKRKPTD 293
           LTKEET LYE A+SSM AFKKWR+GGPRF+RAS+L RKRKPTD
Sbjct: 144 LTKEETNLYETAQSSMAAFKKWRMGGPRFQRASVLGRKRKPTD 186


>ref|XP_004138422.1| PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis
           sativus] gi|449519657|ref|XP_004166851.1| PREDICTED: DNA
           replication complex GINS protein PSF3-like [Cucumis
           sativus]
          Length = 189

 Score =  152 bits (383), Expect = 6e-35
 Identities = 73/104 (70%), Positives = 88/104 (84%), Gaps = 1/104 (0%)
 Frame = -2

Query: 601 ACVDLKSRCSYFYELGCKVAPLIGDRTIGSFLLYAFTGRYKEVLSKAHSAAFIMAPKFLT 422
           A VDL+SRC +FYE GCK+APL+GDRTIGS+LL     RYKEVL+KAHSA F  + K+L 
Sbjct: 86  AFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTLKSRYKEVLTKAHSAVFAASSKYLA 145

Query: 421 LLTKEETQLYEAARSSMTAFKKWRVGGPRFERASIL-RKRKPTD 293
           LL+KEET++YEAA+SSMTAFKKWR+GGPRF+RAS L RKRK T+
Sbjct: 146 LLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE 189


>gb|AFK34889.1| unknown [Medicago truncatula]
          Length = 186

 Score =  149 bits (375), Expect = 5e-34
 Identities = 71/104 (68%), Positives = 84/104 (80%), Gaps = 1/104 (0%)
 Frame = -2

Query: 601 ACVDLKSRCSYFYELGCKVAPLIGDRTIGSFLLYAFTGRYKEVLSKAHSAAFIMAPKFLT 422
           ACVDL+SRC YFYE GCK+AP++GDRTIG  LL AF  RYKEVL+KAH+AA     KF T
Sbjct: 83  ACVDLRSRCPYFYEFGCKIAPIVGDRTIGFLLLSAFKNRYKEVLTKAHTAAIAAGSKFWT 142

Query: 421 LLTKEETQLYEAARSSMTAFKKWRVGGPRFERASIL-RKRKPTD 293
           +LT EE  LYE A+S+M +FKKWR+GGPRF+ ASIL RKRKPT+
Sbjct: 143 ILTNEEINLYETAQSAMASFKKWRMGGPRFQIASILGRKRKPTE 186


>ref|XP_003600887.1| DNA replication complex GINS protein PSF3 [Medicago truncatula]
           gi|355489935|gb|AES71138.1| DNA replication complex GINS
           protein PSF3 [Medicago truncatula]
          Length = 186

 Score =  149 bits (375), Expect = 5e-34
 Identities = 71/104 (68%), Positives = 84/104 (80%), Gaps = 1/104 (0%)
 Frame = -2

Query: 601 ACVDLKSRCSYFYELGCKVAPLIGDRTIGSFLLYAFTGRYKEVLSKAHSAAFIMAPKFLT 422
           ACVDL+SRC YFYE GCK+AP++GDRTIG  LL AF  RYKEVL+KAH+AA     KF T
Sbjct: 83  ACVDLRSRCPYFYEFGCKIAPIVGDRTIGFLLLSAFKNRYKEVLTKAHTAAIAAGSKFWT 142

Query: 421 LLTKEETQLYEAARSSMTAFKKWRVGGPRFERASIL-RKRKPTD 293
           +LT EE  LYE A+S+M +FKKWR+GGPRF+ ASIL RKRKPT+
Sbjct: 143 ILTNEEINLYETAQSAMASFKKWRMGGPRFQIASILGRKRKPTE 186


>dbj|BAK07935.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 194

 Score =  147 bits (371), Expect = 1e-33
 Identities = 68/101 (67%), Positives = 85/101 (84%), Gaps = 1/101 (0%)
 Frame = -2

Query: 601 ACVDLKSRCSYFYELGCKVAPLIGDRTIGSFLLYAFTGRYKEVLSKAHSAAFIMAPKFLT 422
           ACVDL+ RC YFYELGCK+ PL+GD++IG FL YAFT RYKE+LSKAHS++ +  PKF T
Sbjct: 84  ACVDLRVRCPYFYELGCKIVPLVGDKSIGQFLRYAFTSRYKEILSKAHSSSTMTVPKFAT 143

Query: 421 LLTKEETQLYEAARSSMTAFKKWRVGGPRFERASIL-RKRK 302
            LTKEE Q++E+AR SM++F+KWRVGG R ++ASIL RKRK
Sbjct: 144 RLTKEEAQVFESARESMSSFRKWRVGGARLQKASILGRKRK 184