BLASTX nr result

ID: Coptis24_contig00035474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035474
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319088.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002332032.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32
ref|XP_004139387.1| PREDICTED: uncharacterized protein LOC101220...   140   1e-31
ref|XP_002521947.1| hypothetical protein RCOM_0607680 [Ricinus c...   135   5e-30
ref|XP_002263011.1| PREDICTED: uncharacterized protein LOC100258...   131   7e-29

>ref|XP_002319088.1| predicted protein [Populus trichocarpa] gi|222857464|gb|EEE95011.1|
           predicted protein [Populus trichocarpa]
          Length = 954

 Score =  146 bits (368), Expect = 2e-33
 Identities = 70/127 (55%), Positives = 81/127 (63%)
 Frame = +1

Query: 22  SMVSRKSSSVKGWRCCRGVTSVLTSAVQEWXXXXXXXXXXXXXXXVTRLARFWELETPCL 201
           S VS   S  K W     +++ L SAV EW               +TR A  WEL+TPCL
Sbjct: 4   SGVSSIQSKKKSW----SISTALASAVLEWLLMCMLFTNAIFSYLITRFACQWELQTPCL 59

Query: 202 LCSRLDHLLGHEKPGFYWDLTCSSHKFEISSLVFCHAHNKLADVHGLCEGCLLSFATEKK 381
           LCSRLDH+LG  K  +YWDL C +HK E+SSLVFCHAHN L DVHG+CE CL SFAT  K
Sbjct: 60  LCSRLDHILGSRKLRYYWDLICGNHKLEVSSLVFCHAHNNLVDVHGMCENCLFSFATTNK 119

Query: 382 SNSETYR 402
           SN+ETYR
Sbjct: 120 SNAETYR 126


>ref|XP_002332032.1| predicted protein [Populus trichocarpa] gi|222875257|gb|EEF12388.1|
           predicted protein [Populus trichocarpa]
          Length = 925

 Score =  140 bits (354), Expect = 8e-32
 Identities = 65/120 (54%), Positives = 79/120 (65%)
 Frame = +1

Query: 43  SSVKGWRCCRGVTSVLTSAVQEWXXXXXXXXXXXXXXXVTRLARFWELETPCLLCSRLDH 222
           SSVK  +    +++ L SA  EW               +T+ A  WEL+TPCLLCSRLDH
Sbjct: 7   SSVKSKKRSWSISAALASAALEWLLMCMLFINAIFSYLITKFACQWELQTPCLLCSRLDH 66

Query: 223 LLGHEKPGFYWDLTCSSHKFEISSLVFCHAHNKLADVHGLCEGCLLSFATEKKSNSETYR 402
           +LG +   +YWDL C +HK EISSLVFCHAHN L +VHG+CE CL SFAT  KSN+ETYR
Sbjct: 67  ILGSKNLKYYWDLICGNHKLEISSLVFCHAHNNLVNVHGMCENCLFSFATTNKSNAETYR 126


>ref|XP_004139387.1| PREDICTED: uncharacterized protein LOC101220667 [Cucumis sativus]
           gi|449519000|ref|XP_004166523.1| PREDICTED:
           uncharacterized protein LOC101225941 [Cucumis sativus]
          Length = 904

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/121 (56%), Positives = 81/121 (66%)
 Frame = +1

Query: 40  SSSVKGWRCCRGVTSVLTSAVQEWXXXXXXXXXXXXXXXVTRLARFWELETPCLLCSRLD 219
           +SSV+  R  R + + L SAV EW               +T+ A FW+L TPCLLCSRLD
Sbjct: 3   TSSVEA-RSERSLFTSLLSAVSEWLLICMLFVDSIFSFFITKCAHFWKLHTPCLLCSRLD 61

Query: 220 HLLGHEKPGFYWDLTCSSHKFEISSLVFCHAHNKLADVHGLCEGCLLSFATEKKSNSETY 399
           H+ G EK G+ W+L CS HK E+SSLV CHAHNKL +VH +CE CL SFAT KKSNSETY
Sbjct: 62  HIFGSEKRGYVWNLICSKHKVELSSLVLCHAHNKLVNVHEMCENCLFSFATFKKSNSETY 121

Query: 400 R 402
           R
Sbjct: 122 R 122


>ref|XP_002521947.1| hypothetical protein RCOM_0607680 [Ricinus communis]
           gi|223538751|gb|EEF40351.1| hypothetical protein
           RCOM_0607680 [Ricinus communis]
          Length = 1162

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/120 (53%), Positives = 79/120 (65%)
 Frame = +1

Query: 43  SSVKGWRCCRGVTSVLTSAVQEWXXXXXXXXXXXXXXXVTRLARFWELETPCLLCSRLDH 222
           SSVK  +    + + L SA  EW               +T+ A ++EL+TPCLLCSRLDH
Sbjct: 7   SSVKSQKKYCSIRTALASAFLEWLLICLLFIEAIFSYLITKFACYYELQTPCLLCSRLDH 66

Query: 223 LLGHEKPGFYWDLTCSSHKFEISSLVFCHAHNKLADVHGLCEGCLLSFATEKKSNSETYR 402
           +LG+++  +Y DL C  HK EISSLV CHAHNKL DVHG+CE CL SFAT  KSN+ETYR
Sbjct: 67  ILGNKRLKYYRDLICGKHKLEISSLVLCHAHNKLVDVHGMCESCLFSFATINKSNAETYR 126


>ref|XP_002263011.1| PREDICTED: uncharacterized protein LOC100258654 [Vitis vinifera]
          Length = 877

 Score =  131 bits (329), Expect = 7e-29
 Identities = 65/120 (54%), Positives = 75/120 (62%)
 Frame = +1

Query: 43  SSVKGWRCCRGVTSVLTSAVQEWXXXXXXXXXXXXXXXVTRLARFWELETPCLLCSRLDH 222
           S VK     +G T+VLTSA  EW               VT+ AR  EL+ PCLLCSRLD 
Sbjct: 4   SPVKSQNVSQGFTTVLTSAFFEWLLMFMLFIDGIFSYLVTKFARSCELQAPCLLCSRLDR 63

Query: 223 LLGHEKPGFYWDLTCSSHKFEISSLVFCHAHNKLADVHGLCEGCLLSFATEKKSNSETYR 402
           +LG EK GFYWDL C +HK EISSLV C+ H KL +  G+CE CL SFAT  K N+ETYR
Sbjct: 64  VLGKEKLGFYWDLICHNHKLEISSLVLCYTHKKLVNGRGMCENCLFSFATINKYNAETYR 123


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