BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035456
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36340.3| unnamed protein product [Vitis vinifera]              114   8e-24
ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24
ref|XP_004167701.1| PREDICTED: pentatricopeptide repeat-containi...   113   1e-23
ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containi...   113   2e-23
ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago t...   108   6e-22

>emb|CBI36340.3| unnamed protein product [Vitis vinifera]
          Length = 630

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/67 (77%), Positives = 57/67 (85%)
 Frame = -2

Query: 334 EKLAIAFGLLKTPSEAPIHVIKNLRMCHDCHIAVKLISEVTRRKIVVRDANRFHCFQSGT 155
           EKLAIA+GL+KTPS API VIKNLRMC DCH AVKLIS+VT R I+VRDANRFHCF  G 
Sbjct: 564 EKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGG 623

Query: 154 CTCGDYW 134
           C+C DYW
Sbjct: 624 CSCADYW 630


>ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/67 (77%), Positives = 57/67 (85%)
 Frame = -2

Query: 334 EKLAIAFGLLKTPSEAPIHVIKNLRMCHDCHIAVKLISEVTRRKIVVRDANRFHCFQSGT 155
           EKLAIA+GL+KTPS API VIKNLRMC DCH AVKLIS+VT R I+VRDANRFHCF  G 
Sbjct: 637 EKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGG 696

Query: 154 CTCGDYW 134
           C+C DYW
Sbjct: 697 CSCADYW 703


>ref|XP_004167701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like, partial [Cucumis sativus]
          Length = 390

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/67 (76%), Positives = 58/67 (86%)
 Frame = -2

Query: 334 EKLAIAFGLLKTPSEAPIHVIKNLRMCHDCHIAVKLISEVTRRKIVVRDANRFHCFQSGT 155
           EKLA+A+GL+KTPS API VIKNLRMC DCH A+KLIS+V  R IVVRDANRFH FQ+G 
Sbjct: 324 EKLAVAYGLMKTPSGAPIRVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGY 383

Query: 154 CTCGDYW 134
           C+CGDYW
Sbjct: 384 CSCGDYW 390


>ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/67 (76%), Positives = 58/67 (86%)
 Frame = -2

Query: 334 EKLAIAFGLLKTPSEAPIHVIKNLRMCHDCHIAVKLISEVTRRKIVVRDANRFHCFQSGT 155
           EKLA+A+GL+KTPS API VIKNLRMC DCH A+KLIS+V  R IVVRDANRFH FQ+G 
Sbjct: 631 EKLAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGC 690

Query: 154 CTCGDYW 134
           C+CGDYW
Sbjct: 691 CSCGDYW 697


>ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355496269|gb|AES77472.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 700

 Score =  108 bits (269), Expect = 6e-22
 Identities = 49/67 (73%), Positives = 57/67 (85%)
 Frame = -2

Query: 334 EKLAIAFGLLKTPSEAPIHVIKNLRMCHDCHIAVKLISEVTRRKIVVRDANRFHCFQSGT 155
           EKLAIA+GL+K PS API VIKNLR+C DCH AVKLIS+VT R I+VRDA+RFH F+ GT
Sbjct: 634 EKLAIAYGLMKIPSPAPIRVIKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGT 693

Query: 154 CTCGDYW 134
           CTC D+W
Sbjct: 694 CTCTDHW 700